Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02475 Erythranthe guttata HOM05D005224 ORTHO05D006372 1.8e-43 178.7 82 100.0
Migut.D00213 Erythranthe guttata HOM05D005224 ORTHO05D006372 9.9e-42 172.9 82 96.3
unitig_0.g663 Utricularia gibba HOM05D005224 ORTHO05D006372 1.5e-37 159.1 80 90.0
HanXRQChr17g0538761 Helianthus annuus HOM05D005224 ORTHO05D006372 3.6e-36 154.5 84 84.5
HanXRQChr06g0173941 Helianthus annuus HOM05D005224 ORTHO05D006372 4.8e-36 154.1 78 87.2
ECA246G3542 Erigeron canadensis HOM05D005224 ORTHO05D006372 8.1e-36 153.3 80 86.2
Potri.014G129600 Populus trichocarpa HOM05D005224 ORTHO05D006372 8.1e-36 153.3 83 84.3
Lsat_1_v5_gn_3_24761 Lactuca sativa HOM05D005224 ORTHO05D006372 1.4e-35 152.5 75 89.3
Cfa005919 Carpinus fangiana HOM05D005224 ORTHO05D006372 2.4e-35 151.8 83 83.1
Prupe.8G260800 Prunus persica HOM05D005224 ORTHO05D006372 2.4e-35 151.8 81 82.7
Haze_04931 Corylus avellana HOM05D005224 ORTHO05D006372 3.1e-35 151.4 83 81.9
Manes.05G062300 Manihot esculenta HOM05D005224 ORTHO05D006372 3.1e-35 151.4 83 81.9
Glyma.03G214500 Glycine max HOM05D005224 ORTHO05D006372 4.0e-35 151.0 81 81.5
Manes.01G218400 Manihot esculenta HOM05D005224 ORTHO05D006372 4.0e-35 151.0 83 80.7
TWI23G0618 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 4.0e-35 151.0 84 83.3
Cc04_g11150 Coffea canephora HOM05D005224 ORTHO05D006372 5.3e-35 150.6 76 86.8
DCAR_027069 Daucus carota HOM05D005224 ORTHO05D006372 5.3e-35 150.6 74 90.5
MD03G1287600 Malus domestica HOM05D005224 ORTHO05D006372 5.3e-35 150.6 81 81.5
Phvul.001G207200 Phaseolus vulgaris HOM05D005224 ORTHO05D006372 5.3e-35 150.6 81 82.7
Gohir.A12G130700 Gossypium hirsutum HOM05D005224 ORTHO05D006372 6.9e-35 150.2 81 82.7
Gohir.D12G134600 Gossypium hirsutum HOM05D005224 ORTHO05D006372 6.9e-35 150.2 81 82.7
Gorai.008G145500 Gossypium raimondii HOM05D005224 ORTHO05D006372 6.9e-35 150.2 81 82.7
vmacro03691 Vaccinium macrocarpon HOM05D005224 ORTHO05D006372 6.9e-35 150.2 76 88.2
RcHm_v2.0_Chr6g0293941 Rosa chinensis HOM05D005224 ORTHO05D006372 9.0e-35 149.8 81 81.5
CSS0034435 Camellia sinensis var. sinensis HOM05D005224 ORTHO05D006372 1.5e-34 149.1 76 88.2
FvH4_2g25680 Fragaria vesca HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 80.2
FAN15G2088 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 80.2
FAN20G0551 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 80.2
FAN27G2170 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 80.2
Glyma.19G211200 Glycine max HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 80.2
Hund11874 Selenicereus undatus HOM05D005224 ORTHO05D006372 1.5e-34 149.1 81 82.7
TAR365G0183 Trochodendron aralioides HOM05D005224 ORTHO05D006372 1.5e-34 149.1 78 84.6
Gohir.A08G075800 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.0e-34 148.7 81 80.2
Gorai.004G089700 Gossypium raimondii HOM05D005224 ORTHO05D006372 2.0e-34 148.7 81 80.2
PSO210G7006 Papaver somniferum HOM05D005224 ORTHO05D006372 2.0e-34 148.7 85 82.4
Dinv29760 Davidia involucrata HOM05D005224 ORTHO05D006372 2.6e-34 148.3 74 87.8
Dinv44366 Davidia involucrata HOM05D005224 ORTHO05D006372 2.6e-34 148.3 74 87.8
Thhalv10001702m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.6e-34 148.3 80 81.2
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla HOM05D005224 ORTHO05D006372 2.6e-34 148.3 81 82.7
Actinidia24346 Actinidia chinensis HOM05D001413 ORTHO05D001385 3.4e-34 147.9 73 91.8
CARHR143080 Cardamine hirsuta HOM05D005224 ORTHO05D006372 3.4e-34 147.9 80 81.2
Ciclev10033216m.g Citrus clementina HOM05D005224 ORTHO05D006372 3.4e-34 147.9 82 81.7
Sp4g29630 Schrenkiella parvula HOM05D005224 ORTHO05D006372 3.4e-34 147.9 80 81.2
CANSAT25G2283 Cannabis sativa HOM05D005224 ORTHO05D006372 4.4e-34 147.5 82 81.7
Thhalv10006347m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 4.4e-34 147.5 84 79.8
QL12p028550 Quercus lobata HOM05D005224 ORTHO05D006372 4.4e-34 147.5 83 80.7
THA.LOC104817499 Tarenaya hassleriana HOM05D005224 ORTHO05D006372 4.4e-34 147.5 84 79.8
Ah.02g128370 Amaranthus hybridus HOM05D005224 ORTHO05D006372 5.8e-34 147.1 81 80.2
A07p26090 Brassica napus HOM05D005224 ORTHO05D006372 5.8e-34 147.1 81 80.2
Gohir.D08G085200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 5.8e-34 147.1 81 79.0
HPP92_017223 Vanilla planifolia HOM05D005224 ORTHO05D006372 5.8e-34 147.1 84 79.8
AT3G62790 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 7.6e-34 146.7 84 79.8
Carub.0005s2944 Capsella rubella HOM05D005224 ORTHO05D006372 7.6e-34 146.7 84 79.8
Duzib211G0376 Durio zibethinus HOM05D005224 ORTHO05D006372 7.6e-34 146.7 81 81.5
Gohir.A08G042400 Gossypium hirsutum HOM05D005224 ORTHO05D006372 7.6e-34 146.7 81 80.2
Gohir.D08G052200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 7.6e-34 146.7 81 80.2
Gorai.004G052300 Gossypium raimondii HOM05D005224 ORTHO05D006372 7.6e-34 146.7 81 80.2
PGR042G0105 Punica granatum HOM05D005224 ORTHO05D006372 7.6e-34 146.7 84 81.0
TPR.G9599 Trifolium pratense HOM05D005224 ORTHO05D006372 7.6e-34 146.7 83 81.9
GSVIVG01035146001 Vitis vinifera HOM05D005224 ORTHO05D006372 7.6e-34 146.7 76 85.5
Aa31LG1G29010 Aethionema arabicum HOM05D005224 ORTHO05D006372 9.9e-34 146.4 80 80.0
AL4G47260 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 9.9e-34 146.4 84 79.8
CDE09G0321 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 9.9e-34 146.4 85 78.8
PSO210G2815 Papaver somniferum HOM05D005224 ORTHO05D006372 9.9e-34 146.4 74 87.8
Cpa.g.sc19.280 Carica papaya HOM05D005224 ORTHO05D006372 1.3e-33 146.0 81 80.2
Lalb_Chr04g0259841 Lupinus albus HOM05D005224 ORTHO05D006372 1.3e-33 146.0 83 80.7
TWI14G1007 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 1.3e-33 146.0 84 78.6
Actinidia32220 Actinidia chinensis HOM05D005224 ORTHO05D006372 1.7e-33 145.6 76 86.8
AT2G47690 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 1.7e-33 145.6 84 79.8
EL10Ac3g05917 Beta vulgaris HOM05D005224 ORTHO05D006372 1.7e-33 145.6 74 86.5
Eucgr.K03475 Eucalyptus grandis HOM05D005224 ORTHO05D006372 1.7e-33 145.6 75 84.0
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 1.7e-33 145.6 82 81.7
PSO170G2085 Papaver somniferum HOM05D005224 ORTHO05D006372 1.7e-33 145.6 85 80.0
BcaB02g07318 Brassica carinata HOM05D005224 ORTHO05D006372 2.2e-33 145.2 81 79.0
BcaB02g08753 Brassica carinata HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
BcaC07g40762 Brassica carinata HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
BcaC07g42731 Brassica carinata HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
BcaNung06420 Brassica carinata HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
A09p54640 Brassica napus HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
C08p37540 Brassica napus HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
BraA09t40875Z Brassica rapa HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
PSO832G3231 Papaver somniferum HOM05D005224 ORTHO05D006372 2.2e-33 145.2 74 86.5
Sp5g00730 Schrenkiella parvula HOM05D005224 ORTHO05D006372 2.2e-33 145.2 84 78.6
Zm00001eb039670 Zea mays HOM05D005224 ORTHO05D006372 2.9e-33 144.8 87 77.0
BcaC02g12549 Brassica carinata HOM05D005224 ORTHO05D006372 3.8e-33 144.4 84 78.6
C04p00180 Brassica napus HOM05D005224 ORTHO05D006372 3.8e-33 144.4 84 78.6
BolC4t21665H Brassica oleracea HOM05D005224 ORTHO05D006372 3.8e-33 144.4 84 78.6
Duzib133G0273 Durio zibethinus HOM05D005224 ORTHO05D006372 3.8e-33 144.4 81 79.0
Nn4g25791 Nelumbo nucifera HOM05D005224 ORTHO05D006372 3.8e-33 144.4 76 84.2
Psat3g022120 Pisum sativum HOM05D005224 ORTHO05D006372 3.8e-33 144.4 81 80.2
Potri.002G204800 Populus trichocarpa HOM05D005224 ORTHO05D006372 3.8e-33 144.4 74 85.1
AL5G45570 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 4.9e-33 144.1 80 80.0
BolC6t38010H Brassica oleracea HOM05D005224 ORTHO05D006372 4.9e-33 144.1 78 80.8
Lj1g0012977 Lotus japonicus HOM05D005224 ORTHO05D006372 6.4e-33 143.7 83 79.5
A05p00270 Brassica napus HOM05D005224 ORTHO05D006372 8.4e-33 143.3 84 77.4
CARHR173060 Cardamine hirsuta HOM05D005224 ORTHO05D006372 8.4e-33 143.3 81 81.5
CDE02G3260 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 8.4e-33 143.3 85 77.6
Thecc.01G299700 Theobroma cacao HOM05D005224 ORTHO05D006372 8.4e-33 143.3 81 79.0
ClCG10G010880 Citrullus lanatus HOM05D005224 ORTHO05D006372 1.1e-32 142.9 82 79.3
Aqoxy2G02950 Aquilegia oxysepala HOM05D005224 ORTHO05D006372 1.4e-32 142.5 75 82.7
Carub.0004s3041 Capsella rubella HOM05D005224 ORTHO05D006372 1.4e-32 142.5 80 78.8
BraA05t19024Z Brassica rapa HOM05D005224 ORTHO05D006372 1.9e-32 142.1 73 84.9
Sed0018249 Sechium edule HOM05D005224 ORTHO05D006372 1.9e-32 142.1 82 79.3
Lalb_Chr15g0078521 Lupinus albus HOM05D005224 ORTHO05D006372 2.4e-32 141.7 81 77.8
Nitab4.5_0011375g0020 Nicotiana tabacum HOM05D005224 ORTHO05D006372 2.4e-32 141.7 69 88.4
ATR0796G245 Amborella trichopoda HOM05D005224 ORTHO05D006372 3.2e-32 141.4 80 77.5
CiPaw.07G108200 Carya illinoinensis HOM05D005224 ORTHO05D006372 3.2e-32 141.4 83 77.1
C06p28410 Brassica napus HOM05D005224 ORTHO05D006372 4.2e-32 141.0 78 79.5
CsaV3_4G000760 Cucumis sativus L. HOM05D005224 ORTHO05D006372 4.2e-32 141.0 82 79.3
Sed0019318 Sechium edule HOM05D005224 ORTHO05D006372 4.2e-32 141.0 75 82.7
MBI18_g06871_MAGBIO Magnolia biondii HOM05D005224 ORTHO05D006372 5.4e-32 140.6 71 85.9
ECA240G1836 Erigeron canadensis HOM05D002891 ORTHO05D003369 1.6e-31 139.0 77 83.1
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea HOM05D005224 ORTHO05D006372 2.1e-31 138.7 83 77.1
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea HOM05D005224 ORTHO05D006372 2.1e-31 138.7 83 77.1
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea HOM05D005224 ORTHO05D006372 2.1e-31 138.7 83 77.1
Os08g0556600 Oryza sativa ssp. japonica HOM05D005224 ORTHO05D006372 2.1e-31 138.7 91 73.6
Peaxi162Scf00589g00224 Petunia axillaris HOM05D005224 ORTHO05D006372 2.7e-31 138.3 65 90.8
MELO3C017960.2 Cucumis melo HOM05D005224 ORTHO05D006372 4.6e-31 137.5 82 75.6
COL.COLO4_23352 Corchorus olitorius HOM05D005224 ORTHO05D006372 6.0e-31 137.1 102 64.7
SalBow3G4056 Salvia bowleyana HOM05D005224 ORTHO05D006372 6.0e-31 137.1 113 64.6
Sc25g0004000 Simmondsia chinensis HOM05D005224 ORTHO05D006372 6.0e-31 137.1 102 66.7
Solyc11g005880.2 Solanum lycopersicum HOM05D005224 ORTHO05D006372 2.5e-29 131.7 62 90.3
Sopen11g001830 Solanum pennellii HOM05D005224 ORTHO05D006372 2.5e-29 131.7 62 90.3
Nitab4.5_0000805g0100 Nicotiana tabacum HOM05D005224 ORTHO05D006372 3.3e-29 131.3 61 90.2
PGSC0003DMG400028681 Solanum tuberosum HOM05D005224 ORTHO05D006372 7.3e-29 130.2 61 90.2
TAR370G0003 Trochodendron aralioides HOM05D005224 ORTHO05D006372 9.6e-29 129.8 63 87.3
CAN.G652.1 Capsicum annuum HOM05D005224 ORTHO05D006372 1.3e-28 129.4 60 90.0
SHI19781 Sapria himalayana HOM05D005224 ORTHO05D006372 2.4e-27 125.2 71 77.5
BcaC08g45239 Brassica carinata HOM05D005224 ORTHO05D006372 5.8e-26 120.6 57 87.7
TAR633G1838 Trochodendron aralioides HOM05D005224 ORTHO05D006372 2.1e-23 112.1 64 76.6
Oeu054123.1 Olea europaea HOM05D005224 ORTHO05D006372 2.7e-23 111.7 50 92.0
BraA07t30257Z Brassica rapa HOM05D005224 ORTHO05D006372 1.8e-22 109.0 50 90.0
HanXRQChr08g0223921 Helianthus annuus HOM05D005224 ORTHO05D006372 3.0e-22 108.2 50 90.0
CBR_g52287 Chara braunii HOM05D005224 ORTHO05D006372 1.9e-21 105.5 73 65.8
HanXRQChr09g0263651 Helianthus annuus HOM05D005224 ORTHO05D006372 3.3e-21 104.8 50 86.0
Mapoly0155s0025 Marchantia polymorpha HOM05D005224 ORTHO05D006372 4.8e-20 100.9 85 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis HOM05D005224 ORTHO05D006372 1.8e-19 99.0 73 63.0
MD02G1095800 Malus domestica HOM05D005224 ORTHO05D006372 1.8e-19 99.0 49 81.6
Pp3c11_13470 Physcomitrium patens HOM05D005224 ORTHO05D006372 6.9e-19 97.1 64 62.5
Pp3c7_20680 Physcomitrium patens HOM05D005224 ORTHO05D006372 6.9e-19 97.1 82 54.9
CiPaw.08G095500 Carya illinoinensis HOM05D005224 ORTHO05D006372 3.8e-17 91.3 59 72.9
MCO16G429 Micromonas commoda HOM05D005224 ORTHO05D006372 9.6e-13 76.6 73 47.9
AUR62015428 Chenopodium quinoa HOM05D005224 ORTHO05D006372 3.0e-06 55.1 23 91.3
arahy.Tifrunner.gnm1.ann1.YEW5FF Arachis hypogaea HOM05D005224 ORTHO05D006372 8.7e-06 53.5 29 75.9


User provided reference genes

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