Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.3e-57 226.1 107 100.0
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.9e-33 145.2 107 70.1
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 3.2e-32 141.7 107 64.5
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.9e-29 132.5 111 60.4
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 4.3e-29 131.3 108 63.9
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 7.3e-29 130.6 107 61.7
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.3e-29 130.6 109 57.8
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.8e-28 128.6 109 57.8
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.8e-28 127.9 96 63.5
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.2e-28 127.5 109 56.9
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.4e-27 126.3 101 60.4
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.4e-27 126.3 115 56.5
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 4.0e-27 124.8 115 52.2
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 5.3e-27 124.4 113 58.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 6.9e-27 124.0 109 55.0
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.9e-27 124.0 110 54.5
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.2e-26 123.2 113 55.8
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 2.0e-26 122.5 101 64.4
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.6e-26 122.1 113 54.9
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.5e-26 121.3 110 55.5
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 7.6e-26 120.6 114 57.0
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.6e-26 120.6 113 54.9
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 9.9e-26 120.2 113 54.0
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 9.9e-26 120.2 114 53.5
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.3e-25 119.8 114 55.3
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.3e-25 119.8 116 54.3
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.7e-25 119.4 113 56.6
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.2e-25 119.0 103 60.2
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.8e-25 118.2 114 51.8
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.9e-25 117.9 115 53.9
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 6.4e-25 117.5 109 54.1
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 6.4e-25 117.5 108 55.6
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 8.4e-25 117.1 115 53.9
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 1.1e-24 116.7 106 57.5
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.1e-24 116.7 86 68.6
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.4e-24 116.3 97 57.7
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 1.4e-24 116.3 109 54.1
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.4e-24 116.3 115 54.8
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 1.9e-24 115.9 107 60.7
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.9e-24 115.9 103 57.3
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.4e-24 115.5 100 56.0
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.2e-24 115.2 51 94.1
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.2e-24 115.2 54 88.9
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 4.2e-24 114.8 113 52.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 5.4e-24 114.4 55 87.3
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 5.4e-24 114.4 88 60.2
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 5.4e-24 114.4 106 52.8
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 7.1e-24 114.0 50 94.0
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 9.3e-24 113.6 100 58.0
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 9.3e-24 113.6 109 52.3
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.2e-23 113.2 106 56.6
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.2e-23 113.2 107 56.1
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.2e-23 113.2 107 59.8
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.6e-23 112.8 109 54.1
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.6e-23 112.8 109 54.1
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 1.6e-23 112.8 109 55.0
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.6e-23 112.8 115 53.0
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.6e-23 112.8 100 55.0
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.6e-23 112.8 98 58.2
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.6e-23 112.8 64 73.4
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.6e-23 112.8 107 56.1
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.1e-23 112.5 110 53.6
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.1e-23 112.5 109 53.2
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 2.1e-23 112.5 55 80.0
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 2.1e-23 112.5 107 57.0
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.1e-23 112.5 107 57.0
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.7e-23 112.1 102 56.9
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 3.5e-23 111.7 101 55.4
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 3.5e-23 111.7 101 55.4
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 3.5e-23 111.7 50 92.0
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 4.6e-23 111.3 101 55.4
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 4.6e-23 111.3 106 53.8
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.6e-23 111.3 51 90.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 6.0e-23 110.9 51 88.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 7.9e-23 110.5 71 69.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.0e-22 110.2 112 52.7
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 1.3e-22 109.8 52 84.6
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.3e-22 109.8 107 51.4
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.3e-22 109.8 109 53.2
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.3e-22 109.8 109 52.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 2.3e-22 109.0 109 53.2
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 2.3e-22 109.0 71 67.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 3.0e-22 108.6 113 48.7
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 3.0e-22 108.6 98 56.1
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.0e-22 108.6 109 53.2
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 3.9e-22 108.2 58 82.8
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 6.7e-22 107.5 50 86.0
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 6.7e-22 107.5 50 86.0
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 6.7e-22 107.5 50 86.0
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 8.7e-22 107.1 51 84.3
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 8.7e-22 107.1 51 82.4
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 8.7e-22 107.1 49 85.7
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.1e-21 106.7 113 49.6
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.9e-21 105.9 109 49.5
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.9e-21 105.9 110 49.1
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 2.5e-21 105.5 96 53.1
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 3.3e-21 105.1 66 69.7
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 7.4e-21 104.0 112 50.9
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 7.4e-21 104.0 51 84.3
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.3e-20 103.2 55 74.5
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 2.1e-20 102.4 51 78.4
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.7e-20 101.7 101 54.5
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 4.8e-20 101.3 51 78.4
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.8e-20 101.3 47 83.0
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 8.1e-20 100.5 107 49.5
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 8.1e-20 100.5 114 47.4
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.4e-19 99.0 78 55.1
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 2.6e-18 95.5 51 74.5
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 3.4e-18 95.1 107 45.8
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.3e-17 93.2 75 57.3
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 4.9e-17 91.3 46 78.3
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.5e-16 87.8 108 48.1
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 5.5e-16 87.8 49 67.3
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.7e-15 85.5 49 65.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.3e-13 78.6 49 61.2


User provided reference genes

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