Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 9.4e-101 370.2 182 100.0
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 8.9e-59 230.7 183 65.0
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 2.9e-57 225.7 170 60.6
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 4.9e-57 224.9 177 65.0
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 2.0e-55 219.5 182 63.2
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 2.3e-46 189.5 180 54.4
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 3.1e-43 179.1 187 52.4
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 8.9e-43 177.6 176 55.7
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 5.8e-42 174.9 183 50.3
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 7.5e-42 174.5 177 54.8
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 1.3e-41 173.7 185 51.9
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.7e-41 173.3 187 52.4
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.2e-41 172.9 170 52.4
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 2.2e-41 172.9 185 51.4
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 3.7e-41 172.2 184 50.5
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 6.4e-41 171.4 172 52.3
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 2.4e-40 169.5 176 54.0
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 3.2e-40 169.1 175 52.0
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.2e-40 169.1 187 51.3
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 7.1e-40 167.9 175 53.7
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 7.1e-40 167.9 192 46.4
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 9.2e-40 167.5 156 53.8
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 9.2e-40 167.5 184 48.9
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.2e-39 167.2 157 52.9
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 2.7e-39 166.0 178 52.2
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 4.6e-39 165.2 178 43.8
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 7.8e-39 164.5 170 50.0
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 1.0e-38 164.1 189 48.7
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 1.0e-38 164.1 177 51.4
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.3e-38 163.7 173 50.9
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.7e-38 163.3 155 52.3
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 3.0e-38 162.5 173 50.9
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 3.0e-38 162.5 155 52.3
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 5.1e-38 161.8 178 47.8
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 5.1e-38 161.8 181 49.2
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 5.1e-38 161.8 185 48.1
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 5.1e-38 161.8 173 49.1
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 5.1e-38 161.8 182 48.4
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 6.6e-38 161.4 185 49.2
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 8.6e-38 161.0 184 47.8
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 1.5e-37 160.2 176 44.3
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.9e-37 159.8 182 51.1
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 1.9e-37 159.8 154 50.6
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 2.5e-37 159.5 184 48.9
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.5e-37 159.5 175 49.1
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 3.3e-37 159.1 180 50.0
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 3.3e-37 159.1 176 47.7
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 3.3e-37 159.1 174 50.6
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 4.3e-37 158.7 180 47.8
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 5.6e-37 158.3 182 47.3
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 1.2e-36 157.1 198 44.4
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.1e-36 156.4 158 52.5
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 2.1e-36 156.4 188 46.3
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 2.1e-36 156.4 177 48.6
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 2.8e-36 156.0 155 48.4
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 4.7e-36 155.2 186 46.8
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 4.7e-36 155.2 179 46.4
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 8.1e-36 154.5 179 44.7
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 8.1e-36 154.5 179 44.7
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 8.1e-36 154.5 177 46.3
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 1.4e-35 153.7 184 46.2
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 1.4e-35 153.7 178 47.2
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.4e-35 153.7 178 47.2
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.4e-35 153.7 182 47.3
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 1.8e-35 153.3 178 47.2
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.1e-35 152.5 178 47.2
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 3.1e-35 152.5 178 42.1
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 4.0e-35 152.1 176 47.7
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.0e-35 152.1 178 47.2
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 4.0e-35 152.1 181 44.2
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 5.2e-35 151.8 155 51.6
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 6.8e-35 151.4 185 47.6
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 8.9e-35 151.0 161 48.4
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 2.6e-34 149.4 173 45.1
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 3.4e-34 149.1 176 48.3
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.4e-34 149.1 179 43.0
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 4.4e-34 148.7 180 47.2
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 9.9e-34 147.5 157 48.4
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 9.9e-34 147.5 176 45.5
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 3.8e-33 145.6 181 45.9
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 4.9e-33 145.2 170 45.3
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 6.4e-33 144.8 154 48.1
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 8.4e-33 144.4 183 43.2
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 8.4e-33 144.4 178 43.8
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 1.1e-32 144.1 170 45.9
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.1e-32 144.1 184 47.3
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 5.4e-32 141.7 182 41.8
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 7.1e-32 141.4 182 45.1
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 1.6e-31 140.2 192 42.7
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 6.0e-31 138.3 180 43.3
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.3e-30 137.1 180 45.6
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.7e-30 136.7 175 41.1
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 2.3e-30 136.3 191 40.8
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 2.3e-30 136.3 192 41.7
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 3.0e-30 136.0 175 43.4
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.0e-30 136.0 168 40.5
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 1.9e-29 133.3 180 42.8
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.9e-29 133.3 179 39.1
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.5e-29 132.9 194 40.7
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 7.3e-29 131.3 163 42.3
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 2.1e-28 129.8 157 45.2
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 6.9e-27 124.8 177 39.0
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 3.4e-26 122.5 122 48.4
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 4.4e-26 122.1 172 40.1
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 7.6e-26 121.3 182 40.1
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 9.9e-26 120.9 177 39.0
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 1.3e-25 120.6 182 39.0
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 1.7e-25 120.2 177 39.0
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 2.9e-25 119.4 177 37.9
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 2.9e-25 119.4 177 39.0
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 4.9e-25 118.6 177 38.4
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 8.4e-25 117.9 182 38.5
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 8.4e-25 117.9 182 38.5
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 8.4e-25 117.9 183 40.4
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 8.4e-25 117.9 185 38.4
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 3.2e-24 115.9 184 38.0
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 4.2e-24 115.5 182 37.9
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 5.4e-24 115.2 182 37.9
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 7.1e-24 114.8 182 37.4
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 1.2e-23 114.0 182 37.9
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 2.1e-23 113.2 182 38.5
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 2.7e-23 112.8 184 37.0
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 2.7e-23 112.8 182 37.4
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.6e-23 112.1 182 40.1
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 7.8e-23 111.3 182 37.4
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 7.8e-23 111.3 138 43.5
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 1.0e-22 110.9 182 38.5
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 1.3e-22 110.5 182 38.5
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.7e-22 110.2 177 36.2
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 3.0e-22 109.4 184 37.5
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 3.9e-22 109.0 127 48.0
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.5e-21 107.1 141 46.1
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 7.6e-18 94.7 158 35.4
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.6e-15 87.0 108 47.2
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.8e-14 83.6 149 36.9
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 3.0e-14 82.8 103 45.6
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 5.1e-14 82.0 181 32.6
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 3.3e-13 79.3 186 34.4
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 3.3e-13 79.3 125 38.4
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 1.6e-12 77.0 192 30.7
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 2.1e-12 76.6 118 39.0
Os02g0535300 Oryza sativa ssp. japonica HOM05D005110 ORTHO05D006074 2.4e-11 73.2 207 31.4
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 3.4e-10 69.3 186 32.3
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 9.9e-10 67.8 68 50.0
unitig_0.g1474 Utricularia gibba HOM05D005110 ORTHO05D006074 8.4e-09 64.7 66 48.5
Zm00001eb242880 Zea mays HOM05D005110 ORTHO05D006074 3.2e-08 62.8 208 29.3


User provided reference genes

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