Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 5.4e-96 354.4 186 100.0
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 3.1e-67 258.8 197 73.1
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 9.0e-67 257.3 193 75.6
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.7e-65 253.1 196 75.0
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 2.2e-65 252.7 196 73.5
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 8.5e-65 250.8 159 83.6
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 3.2e-64 248.8 197 72.6
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 7.2e-64 247.7 192 75.5
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.6e-63 246.5 182 74.7
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.6e-63 246.5 188 75.0
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.6e-63 246.5 191 69.6
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 2.1e-63 246.1 192 73.4
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.7e-63 245.7 177 76.3
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 3.6e-63 245.4 163 79.8
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 3.6e-63 245.4 163 79.8
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.4e-62 243.4 164 80.5
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 3.9e-62 241.9 168 78.6
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 5.1e-62 241.5 192 70.3
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 6.7e-62 241.1 194 71.6
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 2.5e-61 239.2 164 79.3
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.5e-61 239.2 164 79.3
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 2.5e-61 239.2 190 72.1
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.3e-61 238.8 174 75.3
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 4.3e-61 238.4 194 74.2
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 9.7e-61 237.3 194 73.7
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.3e-60 236.9 193 69.9
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 1.3e-60 236.9 167 77.2
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.3e-60 236.9 188 71.8
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.7e-60 236.5 160 81.9
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.7e-60 236.5 195 70.8
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.2e-60 236.1 164 78.0
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.8e-60 235.7 156 80.1
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.7e-60 235.3 164 78.0
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.7e-60 235.3 161 79.5
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 3.7e-60 235.3 160 81.2
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 4.8e-60 235.0 182 74.2
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 4.8e-60 235.0 167 76.6
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 4.8e-60 235.0 167 76.6
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 4.8e-60 235.0 186 70.4
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 6.3e-60 234.6 186 70.4
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 8.2e-60 234.2 197 67.5
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 8.2e-60 234.2 197 69.0
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.1e-59 233.8 193 67.4
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.1e-59 233.8 189 70.4
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.4e-59 233.4 154 81.2
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.4e-59 233.4 193 69.9
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 1.8e-59 233.0 159 78.0
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 1.8e-59 233.0 171 74.3
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.4e-59 232.6 159 79.9
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 3.1e-59 232.3 193 67.4
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 3.1e-59 232.3 193 67.4
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.1e-59 232.3 164 77.4
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 3.1e-59 232.3 161 77.6
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 4.1e-59 231.9 167 76.0
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 5.3e-59 231.5 194 67.5
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 5.3e-59 231.5 154 79.9
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 6.9e-59 231.1 193 70.5
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 9.1e-59 230.7 161 77.0
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.2e-58 230.3 193 69.9
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.5e-58 229.9 166 77.1
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.5e-58 229.9 166 75.9
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.5e-58 229.9 183 68.3
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.0e-58 229.6 192 67.2
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 3.4e-58 228.8 192 68.8
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 3.4e-58 228.8 192 68.8
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 3.4e-58 228.8 161 79.5
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 3.4e-58 228.8 159 79.2
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 3.4e-58 228.8 188 68.1
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 5.9e-58 228.0 159 76.1
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 5.9e-58 228.0 165 74.5
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 5.9e-58 228.0 159 78.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 5.9e-58 228.0 193 66.8
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 5.9e-58 228.0 163 74.8
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 7.7e-58 227.6 193 66.8
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 7.7e-58 227.6 193 66.8
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.0e-57 227.3 195 67.7
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.3e-57 226.9 184 67.4
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.9e-57 225.7 152 81.6
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.9e-57 225.7 158 75.3
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 5.0e-57 224.9 148 81.8
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 5.0e-57 224.9 189 67.2
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.4e-56 223.4 190 66.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 3.2e-56 222.2 185 67.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 4.2e-56 221.9 196 64.8
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 4.2e-56 221.9 200 66.5
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 4.2e-56 221.9 152 78.3
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 4.2e-56 221.9 167 72.5
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 5.5e-56 221.5 188 66.5
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 5.5e-56 221.5 161 74.5
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 7.2e-56 221.1 153 80.4
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.6e-55 219.9 191 69.1
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.1e-55 219.5 131 86.3
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 2.1e-55 219.5 200 65.5
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 2.7e-55 219.2 159 74.8
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 3.9e-54 215.3 191 68.1
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 6.7e-54 214.5 160 73.1
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 6.7e-54 214.5 191 67.5
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 2.6e-53 212.6 171 69.6
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.0e-49 200.7 195 63.6
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.7e-49 199.9 146 71.9
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.9e-49 199.1 175 63.4
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 5.0e-49 198.4 183 60.1
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 2.1e-47 193.0 117 84.6
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.7e-47 192.6 154 68.8
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 4.7e-47 191.8 148 67.6
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 8.0e-47 191.0 152 70.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.0e-46 190.7 129 76.0
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 2.3e-46 189.5 160 65.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.0e-45 186.4 118 79.7
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 9.7e-45 184.1 117 82.9
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 1.3e-44 183.7 180 56.7
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.8e-44 182.6 120 81.7
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 7.2e-40 167.9 172 55.8
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.0e-38 164.1 108 79.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.6e-37 159.5 173 51.4
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 5.3e-35 151.8 152 59.2
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 9.1e-35 151.0 166 57.2
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.6e-34 150.2 134 60.4
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.8e-33 145.6 140 55.0
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.7e-31 139.4 86 87.2
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.6e-31 139.0 92 83.7
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.0e-30 137.5 86 86.0
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.2e-26 124.0 135 59.3
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.6e-26 123.6 87 78.2
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 4.5e-26 122.1 92 71.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 2.3e-22 109.8 79 77.2
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 5.9e-18 95.1 118 50.8
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.3e-17 94.0 54 83.3
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.8e-07 59.7 105 36.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 5.2e-06 55.5 128 31.2
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 8.9e-06 54.7 116 31.9


User provided reference genes

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