Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 8.6e-163 577.0 310 100.0
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 3.0e-107 392.5 314 69.4
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 4.2e-101 372.1 310 69.0
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 7.4e-98 361.3 316 65.8
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 2.2e-94 349.7 309 64.7
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 3.6e-84 315.8 309 59.9
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 1.3e-81 307.4 327 55.7
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 1.3e-81 307.4 310 59.0
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 4.8e-81 305.4 312 59.0
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 5.3e-80 302.0 308 58.4
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 1.0e-78 297.7 358 52.5
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.9e-78 296.2 310 57.1
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 6.5e-78 295.0 313 57.2
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 5.5e-77 292.0 326 53.7
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 5.5e-77 292.0 317 56.5
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 1.2e-76 290.8 336 53.3
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 3.6e-76 289.3 309 56.3
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 6.1e-76 288.5 316 57.3
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 1.0e-75 287.7 333 52.9
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.4e-75 287.3 316 55.7
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.0e-75 286.2 315 55.2
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 4.0e-75 285.8 321 54.5
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 4.0e-75 285.8 323 55.7
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 8.8e-75 284.6 315 55.2
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 1.2e-74 284.3 319 54.5
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 2.0e-74 283.5 315 54.9
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 1.7e-73 280.4 310 54.2
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 2.2e-73 280.0 313 54.3
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 2.2e-73 280.0 318 54.1
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 2.2e-73 280.0 323 55.4
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 2.2e-73 280.0 309 56.3
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 2.2e-73 280.0 309 56.6
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 2.8e-73 279.6 317 55.8
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 2.8e-73 279.6 313 54.6
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 3.7e-73 279.3 312 53.8
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 4.8e-73 278.9 322 55.3
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 1.4e-72 277.3 331 52.9
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 3.5e-71 272.7 314 52.9
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 3.5e-71 272.7 215 68.4
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 2.9e-70 269.6 313 52.4
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 6.5e-70 268.5 214 72.0
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 1.1e-69 267.7 310 55.2
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 4.2e-69 265.8 312 52.9
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 4.2e-69 265.8 311 53.4
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 9.4e-69 264.6 321 49.8
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 1.2e-68 264.2 328 52.1
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 3.6e-68 262.7 310 51.9
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 4.7e-68 262.3 315 53.3
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.0e-67 261.2 320 51.2
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.8e-67 260.4 317 50.5
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.8e-67 260.4 324 53.1
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 4.0e-67 259.2 340 51.2
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 2.0e-66 256.9 316 52.5
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 2.6e-66 256.5 312 52.6
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 4.4e-66 255.8 316 50.9
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 5.7e-66 255.4 326 49.4
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 5.7e-66 255.4 309 51.1
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 9.8e-66 254.6 310 50.0
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.7e-65 253.8 322 48.8
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 1.7e-65 253.8 309 52.1
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 1.8e-64 250.4 365 46.3
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.4e-64 250.0 311 51.4
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 7.0e-64 248.4 316 50.0
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 9.1e-64 248.1 326 50.3
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-63 247.7 309 50.8
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-63 247.7 309 50.8
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 1.6e-63 247.3 190 68.9
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 2.7e-63 246.5 325 50.5
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 3.5e-63 246.1 323 48.9
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 3.5e-63 246.1 320 47.2
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 4.5e-63 245.7 316 49.4
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 5.9e-63 245.4 314 49.0
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 5.9e-63 245.4 315 50.5
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 7.7e-63 245.0 312 51.3
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 1.3e-62 244.2 257 55.6
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 1.7e-62 243.8 325 49.8
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 1.7e-62 243.8 337 49.0
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 1.7e-62 243.8 256 55.5
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.3e-62 243.4 327 49.5
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 2.9e-62 243.0 326 50.0
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 3.8e-62 242.7 319 49.5
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 3.8e-62 242.7 319 49.5
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 3.8e-62 242.7 320 48.8
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 5.0e-62 242.3 316 50.0
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 8.6e-62 241.5 317 47.3
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 8.6e-62 241.5 301 52.2
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 1.1e-61 241.1 331 48.6
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 7.2e-61 238.4 323 47.7
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 9.5e-61 238.0 312 49.4
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 1.2e-60 237.7 318 49.4
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 4.7e-60 235.7 317 48.9
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 8.0e-60 235.0 317 47.9
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 1.4e-59 234.2 318 49.7
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 1.2e-58 231.1 191 66.0
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 1.2e-58 231.1 191 66.0
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 4.4e-58 229.2 326 47.9
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 7.5e-58 228.4 319 45.5
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 2.2e-57 226.9 337 47.5
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 4.9e-57 225.7 205 61.5
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 4.9e-57 225.7 205 61.5
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 8.3e-57 224.9 261 51.7
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 7.0e-56 221.9 206 61.7
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 9.2e-56 221.5 290 49.0
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.2e-55 221.1 309 44.0
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 8.6e-54 214.9 309 46.3
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 2.1e-52 210.3 336 42.3
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 5.2e-51 205.7 326 44.2
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 2.0e-50 203.8 312 42.3
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 3.4e-50 203.0 332 43.7
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 2.2e-49 200.3 191 59.2
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 2.9e-49 199.9 322 44.4
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 6.4e-49 198.7 205 58.5
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 1.1e-48 198.0 174 64.4
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.2e-47 194.5 341 41.1
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 1.0e-46 191.4 265 47.2
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-46 190.7 210 55.7
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 3.9e-46 189.5 309 45.0
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.3e-45 186.4 224 50.0
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 9.5e-45 184.9 228 49.6
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 1.7e-41 174.1 333 36.9
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 3.7e-41 172.9 151 62.3
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 1.2e-39 167.9 264 42.4
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 2.1e-39 167.2 305 40.0
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 5.0e-38 162.5 238 45.8
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 5.0e-38 162.5 287 39.0
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 1.1e-35 154.8 212 46.7
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 5.2e-35 152.5 170 52.9
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 2.0e-34 150.6 269 41.3
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 4.4e-34 149.4 216 48.1
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 4.1e-32 142.9 203 42.4
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 5.4e-32 142.5 216 43.1
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 9.2e-32 141.7 222 46.4
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.6e-31 141.0 101 73.3
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 4.6e-31 139.4 162 50.6
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.0e-30 138.3 190 46.3
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.1e-29 134.8 106 67.0
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 5.2e-27 125.9 106 65.1
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.2e-26 124.8 270 39.6
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.9e-25 120.2 311 35.0
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 2.4e-24 117.1 99 61.6
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 1.3e-22 111.3 150 49.3
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.5e-21 107.1 98 62.2
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 2.0e-18 97.4 81 61.7
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.2e-15 88.2 71 66.2
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 1.0e-14 85.1 95 52.6
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 2.5e-13 80.5 95 50.5
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 2.1e-12 77.4 310 31.0
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 2.0e-10 70.9 57 64.9
SalBow6G0979 Salvia bowleyana HOM05D002737 ORTHO05D005828 1.7e-09 67.8 84 47.6
AagrBONN_evm.TU.Sc2ySwM_368.3190 Anthoceros agrestis HOM05D000001 ORTHO05D072262 2.2e-09 67.4 56 62.5
CARHR119790 Cardamine hirsuta HOM05D002737 ORTHO05D005828 2.3e-06 57.4 165 32.1
Cpa.g.sc23.121 Carica papaya HOM05D002737 ORTHO05D005828 3.9e-06 56.6 147 35.4


User provided reference genes

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