Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 2.4e-62 241.9 115 100.0
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.5e-56 222.6 115 89.6
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 2.0e-56 222.2 115 89.6
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.4e-54 216.1 115 85.2
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 5.4e-54 214.2 115 84.3
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.1e-54 213.8 114 86.0
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.1e-54 213.8 114 86.0
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.6e-53 212.6 113 84.1
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 2.7e-53 211.8 114 83.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.7e-53 211.8 114 85.1
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 3.5e-53 211.5 114 82.5
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 6.0e-53 210.7 116 86.2
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 7.8e-53 210.3 115 82.6
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 7.8e-53 210.3 114 86.0
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 7.8e-53 210.3 114 82.5
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.0e-52 209.9 113 82.3
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.0e-52 209.9 115 83.5
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.3e-52 209.5 115 83.5
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 2.3e-52 208.8 115 81.7
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 2.3e-52 208.8 115 83.5
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 3.0e-52 208.4 115 82.6
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.1e-52 207.6 115 83.5
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 5.1e-52 207.6 115 82.6
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 5.1e-52 207.6 114 82.5
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 5.1e-52 207.6 114 80.7
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 5.1e-52 207.6 113 81.4
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 5.1e-52 207.6 113 81.4
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 6.6e-52 207.2 115 81.7
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.1e-51 206.5 115 80.9
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.5e-51 206.1 115 81.7
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.5e-51 206.1 113 82.3
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.5e-51 206.1 113 80.5
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 1.5e-51 206.1 115 82.6
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.9e-51 205.7 114 81.6
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.9e-51 205.7 115 81.7
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.9e-51 205.7 115 81.7
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.5e-51 205.3 115 82.6
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 4.3e-51 204.5 114 80.7
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 4.3e-51 204.5 113 79.6
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 4.3e-51 204.5 116 82.8
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 4.3e-51 204.5 113 81.4
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 5.6e-51 204.1 113 79.6
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 7.3e-51 203.8 114 80.7
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 7.3e-51 203.8 118 83.1
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 9.6e-51 203.4 114 78.9
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 9.6e-51 203.4 114 79.8
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 9.6e-51 203.4 116 83.6
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 9.6e-51 203.4 113 78.8
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 9.6e-51 203.4 113 78.8
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.6e-50 202.6 117 79.5
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.6e-50 202.6 114 81.6
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 2.1e-50 202.2 114 82.5
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.1e-50 202.2 115 79.1
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.8e-50 201.8 114 81.6
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.8e-50 201.8 114 81.6
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 3.6e-50 201.4 114 78.9
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 4.8e-50 201.1 114 77.2
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 4.8e-50 201.1 113 78.8
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 4.8e-50 201.1 117 81.2
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 4.8e-50 201.1 115 79.1
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 4.8e-50 201.1 114 78.9
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 6.2e-50 200.7 115 79.1
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 6.2e-50 200.7 116 79.3
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 77.9
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 77.9
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 8.1e-50 200.3 113 78.8
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 8.1e-50 200.3 117 80.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 1.4e-49 199.5 116 79.3
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.8e-49 199.1 117 79.5
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.8e-49 199.1 113 77.9
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.8e-49 199.1 116 79.3
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 3.1e-49 198.4 114 77.2
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 3.1e-49 198.4 115 79.1
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 4.0e-49 198.0 114 78.1
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 5.3e-49 197.6 117 78.6
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 9.0e-49 196.8 116 78.4
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 9.0e-49 196.8 116 77.6
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 9.0e-49 196.8 115 77.4
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.5e-48 196.1 112 80.4
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.5e-48 196.1 112 80.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 2.6e-48 195.3 117 76.1
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 2.6e-48 195.3 115 80.9
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 2.6e-48 195.3 117 75.2
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.4e-48 194.5 112 79.5
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 4.4e-48 194.5 112 78.6
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 5.8e-48 194.1 117 77.8
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 7.6e-48 193.7 113 77.0
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 9.9e-48 193.4 114 75.4
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 9.9e-48 193.4 112 78.6
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.3e-47 193.0 112 79.5
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.2e-47 192.2 113 77.9
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 8.4e-47 190.3 114 73.7
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 2.7e-45 185.3 114 74.6
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.3e-44 182.2 113 75.2
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 3.0e-44 181.8 113 73.5
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.3e-42 176.4 111 75.7
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 4.8e-42 174.5 116 71.6
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.4e-41 172.2 96 80.2
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 4.0e-41 171.4 118 68.6
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 6.9e-41 170.6 109 73.4
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 4.5e-40 167.9 115 69.6
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 7.6e-40 167.2 116 69.8
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 8.4e-39 163.7 86 83.7
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.1e-38 163.3 91 78.0
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.2e-37 159.8 113 63.7
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.6e-37 159.5 113 61.9
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.6e-37 157.9 84 84.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 6.0e-37 157.5 90 77.8
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 7.4e-35 150.6 85 81.2
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.6e-34 149.4 86 82.6
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 4.8e-34 147.9 112 64.3
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 4.8e-34 147.9 85 83.5
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.4e-32 141.7 85 74.1
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.3e-31 139.8 92 71.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 5.5e-30 134.4 89 71.9
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 2.5e-27 125.6 88 71.6
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 9.6e-27 123.6 88 67.0
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 3.7e-26 121.7 88 73.9
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.2e-26 120.6 84 71.4
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.1e-22 110.2 113 51.3
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 6.1e-21 104.4 56 82.1
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 2.3e-20 102.4 111 47.7
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 4.1e-17 91.7 107 45.8
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.7e-15 86.3 58 65.5
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.8e-12 76.3 115 40.0
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.0e-11 72.8 47 70.2
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.1e-09 65.5 38 76.3
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 6.5e-07 57.8 44 63.6
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 1.1e-06 57.0 44 63.6


User provided reference genes

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