Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02306 Erythranthe guttata HOM05D005360 ORTHO05D006501 1.2e-149 533.1 270 100.0
SGA_v2.0_scaffold193G40720 Striga asiatica HOM05D005360 ORTHO05D006501 1.1e-110 403.7 267 76.0
MSTRG.21078 Avicennia marina HOM05D005360 ORTHO05D006501 4.3e-110 401.7 269 76.2
Hma1.2p1_0051F.1_g029700 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 1.9e-97 359.8 270 66.3
CSS0014580 Camellia sinensis var. sinensis HOM05D005360 ORTHO05D006501 2.5e-97 359.4 269 67.7
Dinv29396 Davidia involucrata HOM05D005360 ORTHO05D006501 3.2e-97 359.0 269 65.8
Manes.11G154700 Manihot esculenta HOM05D005360 ORTHO05D006501 3.5e-96 355.5 273 65.9
Lj1A216T24 Lonicera japonica HOM05D005360 ORTHO05D006501 4.6e-96 355.1 269 66.9
Rhsim13G0102900 Rhododendron simsii HOM05D005360 ORTHO05D006501 6.7e-95 351.3 270 67.4
vmacro03239 Vaccinium macrocarpon HOM05D005360 ORTHO05D006501 1.1e-94 350.5 269 66.5
Nitab4.5_0000442g0050 Nicotiana tabacum HOM05D005360 ORTHO05D006501 1.9e-94 349.7 269 66.9
GSVIVG01031434001 Vitis vinifera HOM05D005360 ORTHO05D006501 2.5e-94 349.4 273 65.2
Hund07728 Selenicereus undatus HOM05D005360 ORTHO05D006501 4.3e-94 348.6 250 70.0
Thecc.09G295200 Theobroma cacao HOM05D005360 ORTHO05D006501 4.8e-93 345.1 270 66.7
QL01p014311 Quercus lobata HOM05D005360 ORTHO05D006501 1.4e-92 343.6 273 64.5
Sopen11g026340 Solanum pennellii HOM05D005360 ORTHO05D006501 4.1e-92 342.0 270 65.2
Ciclev10029076m.g Citrus clementina HOM05D005360 ORTHO05D006501 7.6e-91 337.8 269 64.7
Solyc11g066610.2 Solanum lycopersicum HOM05D005360 ORTHO05D006501 7.6e-91 337.8 270 64.1
PGSC0003DMG400000427 Solanum tuberosum HOM05D005360 ORTHO05D006501 1.7e-90 336.7 270 64.1
Actinidia24162 Actinidia chinensis HOM05D005360 ORTHO05D006501 2.2e-90 336.3 259 66.8
Cc04_g14880 Coffea canephora HOM05D005360 ORTHO05D006501 2.9e-90 335.9 277 61.4
CAN.G546.64 Capsicum annuum HOM05D005360 ORTHO05D006501 3.8e-90 335.5 235 70.6
CiPaw.14G105400 Carya illinoinensis HOM05D005360 ORTHO05D006501 2.5e-89 332.8 269 63.6
TAR633G1180 Trochodendron aralioides HOM05D005360 ORTHO05D006501 2.5e-89 332.8 273 62.6
HanXRQChr13g0403531 Helianthus annuus HOM05D005360 ORTHO05D006501 3.2e-89 332.4 270 62.6
Haze_23502 Corylus avellana HOM05D005360 ORTHO05D006501 1.6e-88 330.1 281 61.9
Ca_01695_v3 Cicer arietinum L. HOM05D005360 ORTHO05D006501 1.0e-87 327.4 239 65.3
Eucgr.B03910 Eucalyptus grandis HOM05D005360 ORTHO05D006501 6.7e-87 324.7 273 61.2
DCAR_015495 Daucus carota HOM05D005360 ORTHO05D006501 8.7e-87 324.3 269 62.5
RcHm_v2.0_Chr5g0056101 Rosa chinensis HOM05D005360 ORTHO05D006501 7.4e-86 321.2 232 67.2
EL10Ac9g21036 Beta vulgaris HOM05D005360 ORTHO05D006501 2.2e-85 319.7 238 66.8
Ah.01g016120 Amaranthus hybridus HOM05D005360 ORTHO05D006501 6.3e-85 318.2 243 64.2
TWI31G0773 Tripterygium wilfordii HOM05D005360 ORTHO05D006501 6.3e-85 318.2 275 60.4
Glyma.13G219600 Glycine max HOM05D005360 ORTHO05D006501 1.4e-84 317.0 270 59.6
TPR.G32397 Trifolium pratense HOM05D005360 ORTHO05D006501 2.4e-84 316.2 234 65.4
Atru.chr3.3432 Acer truncatum HOM05D005360 ORTHO05D006501 3.1e-84 315.8 250 63.2
MD11G1152100 Malus domestica HOM05D005360 ORTHO05D006501 9.0e-84 314.3 254 64.6
Sc21g0004290 Simmondsia chinensis HOM05D005360 ORTHO05D006501 9.0e-84 314.3 244 64.8
Gohir.D07G110200 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.2e-83 313.9 270 60.4
Nn6g35157 Nelumbo nucifera HOM05D005360 ORTHO05D006501 1.2e-83 313.9 234 66.7
FvH4_3g30230 Fragaria vesca HOM05D005360 ORTHO05D006501 2.6e-83 312.8 232 64.2
Gorai.001G118400 Gossypium raimondii HOM05D005360 ORTHO05D006501 4.5e-83 312.0 270 60.0
MBI01_g19099_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 1.0e-82 310.8 238 64.7
SalBow6G0303 Salvia bowleyana HOM05D005360 ORTHO05D006501 2.9e-82 309.3 286 57.3
Lj3g0014716 Lotus japonicus HOM05D005360 ORTHO05D006501 7.2e-81 304.7 249 61.4
CANSAT64G2904 Cannabis sativa HOM05D005360 ORTHO05D006501 9.4e-81 304.3 233 63.9
CANSAT64G2995 Cannabis sativa HOM05D005360 ORTHO05D006501 9.4e-81 304.3 233 64.4
Sabra09G0000500 Salix brachista HOM05D005360 ORTHO05D006501 2.1e-80 303.1 272 58.8
Lalb_Chr24g0395031 Lupinus albus HOM05D005360 ORTHO05D006501 1.0e-79 300.8 278 57.2
MD03G1130500 Malus domestica HOM05D005360 ORTHO05D006501 1.4e-79 300.4 255 61.6
Medtr2g084545 Medicago truncatula HOM05D005360 ORTHO05D006501 1.8e-79 300.1 237 62.4
Aqoxy1G01027 Aquilegia oxysepala HOM05D005360 ORTHO05D006501 3.0e-79 299.3 232 61.6
Phvul.006G166300 Phaseolus vulgaris HOM05D005360 ORTHO05D006501 3.9e-79 298.9 271 56.5
A08p35270 Brassica napus HOM05D005360 ORTHO05D006501 5.1e-79 298.5 240 60.0
Lsat_1_v5_gn_6_42160 Lactuca sativa HOM05D005360 ORTHO05D006501 5.1e-79 298.5 270 57.8
Potri.009G002000 Populus trichocarpa HOM05D005360 ORTHO05D006501 5.1e-79 298.5 272 58.1
ATR0665G582 Amborella trichopoda HOM05D005360 ORTHO05D006501 1.1e-78 297.4 256 58.2
BraA08t35436Z Brassica rapa HOM05D005360 ORTHO05D006501 2.5e-78 296.2 240 59.6
PGR102G1574 Punica granatum HOM05D005360 ORTHO05D006501 5.7e-78 295.0 274 59.5
Thhalv10008429m.g Eutrema salsugineum HOM05D005360 ORTHO05D006501 7.4e-78 294.7 240 59.2
THA.LOC104826399 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 7.4e-78 294.7 256 59.0
PSO339G5504 Papaver somniferum HOM05D005360 ORTHO05D006501 3.7e-77 292.4 278 55.4
AL1G18630 Arabidopsis lyrata HOM05D005360 ORTHO05D006501 6.3e-77 291.6 240 58.3
CARHR008050 Cardamine hirsuta HOM05D005360 ORTHO05D006501 6.3e-77 291.6 240 58.3
unitig_899.g14961 Utricularia gibba HOM05D005360 ORTHO05D006501 6.3e-77 291.6 245 62.0
AT1G08220 Arabidopsis thaliana HOM05D005360 ORTHO05D006501 8.2e-77 291.2 240 57.9
Psat5g252440 Pisum sativum HOM05D005360 ORTHO05D006501 8.2e-77 291.2 237 59.1
THA.LOC104800565 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 8.2e-77 291.2 263 57.0
PSO063G2369 Papaver somniferum HOM05D005360 ORTHO05D006501 2.4e-76 289.7 278 55.0
BcaC07g42518 Brassica carinata HOM05D005360 ORTHO05D006501 3.1e-76 289.3 241 60.6
C08p03560 Brassica napus HOM05D005360 ORTHO05D006501 5.3e-76 288.5 240 57.9
C08p50100 Brassica napus HOM05D005360 ORTHO05D006501 5.3e-76 288.5 240 59.2
BolC8t52540H Brassica oleracea HOM05D005360 ORTHO05D006501 5.3e-76 288.5 240 59.2
BolC8t47160H Brassica oleracea HOM05D005360 ORTHO05D006501 1.2e-75 287.3 240 57.5
MBI01_g31369_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 1.2e-75 287.3 238 61.3
Sp1g06870 Schrenkiella parvula HOM05D005360 ORTHO05D006501 2.6e-75 286.2 240 58.3
Carub.0001s0758 Capsella rubella HOM05D005360 ORTHO05D006501 4.5e-75 285.4 270 53.0
CDE09G0858 Ceratophyllum demersum HOM05D005360 ORTHO05D006501 7.7e-75 284.6 236 59.3
FAN11G3336 Fragaria x ananassa HOM05D005360 ORTHO05D006501 6.5e-74 281.6 232 60.3
AUR62031793 Chenopodium quinoa HOM05D005360 ORTHO05D006501 1.1e-73 280.8 238 59.2
Aa31LG1G18020 Aethionema arabicum HOM05D005360 ORTHO05D006501 2.5e-73 279.6 238 57.6
FAN21G0874 Fragaria x ananassa HOM05D005360 ORTHO05D006501 5.5e-73 278.5 232 59.1
Peaxi162Scf00150g00315 Petunia axillaris HOM05D005360 ORTHO05D006501 1.6e-72 276.9 225 63.1
Gohir.A07G106300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.1e-72 276.6 229 62.0
Sed0004275 Sechium edule HOM05D005360 ORTHO05D006501 6.1e-72 275.0 205 66.3
arahy.Tifrunner.gnm1.ann1.9X9VA5 Arachis hypogaea HOM05D005360 ORTHO05D006501 5.7e-70 268.5 223 62.8
CsaV3_6G014530 Cucumis sativus L. HOM05D005360 ORTHO05D006501 2.2e-69 266.5 197 66.5
MELO3C021472.2 Cucumis melo HOM05D005360 ORTHO05D006501 7.0e-68 261.5 197 66.0
BcaB03g13345 Brassica carinata HOM05D005360 ORTHO05D006501 2.9e-66 256.1 275 49.5
HPP92_015033 Vanilla planifolia HOM05D005360 ORTHO05D006501 4.2e-65 252.3 225 57.3
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 5.5e-65 251.9 197 65.5
Duzib168G1167 Durio zibethinus HOM05D005360 ORTHO05D006501 2.1e-64 250.0 270 52.2
TAR633G1639 Trochodendron aralioides HOM05D005360 ORTHO05D006501 2.1e-64 250.0 224 58.0
COL.COLO4_19249 Corchorus olitorius HOM05D000737 ORTHO05D000581 3.6e-64 249.2 191 64.9
Zm00001eb345720 Zea mays HOM05D005360 ORTHO05D006501 8.0e-64 248.1 245 52.7
Os05g0176500 Oryza sativa ssp. japonica HOM05D005360 ORTHO05D006501 6.7e-63 245.0 242 53.3
SHI06160 Sapria himalayana HOM05D005360 ORTHO05D006501 1.3e-61 240.7 220 57.7
Gohir.A07G000166 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.2e-59 234.2 187 63.1
Gohir.1Z049633 Gossypium hirsutum HOM05D005360 ORTHO05D006501 7.7e-59 231.5 182 64.3
HPP92_015112 Vanilla planifolia HOM05D005360 ORTHO05D006501 1.7e-58 230.3 236 53.4
Gohir.A05G054800 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.8e-52 210.3 233 52.8
Prupe.6G115300 Prunus persica HOM05D005360 ORTHO05D006501 1.6e-51 207.2 161 65.8
Gohir.A02G097303 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.1e-44 181.4 231 49.8
Hma1.2p1_0051F.1_g029710 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 9.1e-44 181.4 123 69.9
Oeu026987.1 Olea europaea HOM05D005360 ORTHO05D006501 1.1e-41 174.5 121 67.8
VMungo0540G0253 Vigna mungo HOM05D005360 ORTHO05D006501 2.5e-41 173.3 145 58.6
Gohir.A10G063101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.4e-38 162.5 175 52.6
Gohir.A09G043650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.3e-33 146.0 133 57.9
SMO116G0134 Selaginella moellendorffii HOM05D005360 ORTHO05D006501 1.0e-31 141.4 252 34.1
Cpa.g.sc2403.1 Carica papaya HOM05D005360 ORTHO05D006501 6.8e-31 138.7 154 48.1
Gohir.A11G191650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.0e-30 137.1 259 40.2
CiPaw.13G142900 Carya illinoinensis HOM05D005360 ORTHO05D006501 3.7e-29 132.9 126 54.8
CiPaw.13G143100 Carya illinoinensis HOM05D005360 ORTHO05D006501 6.0e-27 125.6 116 56.0
Gohir.A06G034300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 2.8e-24 116.7 103 56.3
AUR62023988 Chenopodium quinoa HOM05D005360 ORTHO05D006501 8.1e-24 115.2 84 65.5
FAN09G1017 Fragaria x ananassa HOM05D005360 ORTHO05D006501 5.8e-22 109.0 112 50.0
Gohir.A05G334300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 9.8e-22 108.2 114 54.4
FAN09G0332 Fragaria x ananassa HOM05D005360 ORTHO05D006501 7.1e-20 102.1 76 63.2
Gohir.A06G038884 Gossypium hirsutum HOM05D005360 ORTHO05D006501 5.1e-18 95.9 127 47.2
FAN04G1623 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.9e-17 94.0 76 59.2
Gohir.A06G100002 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.3e-17 93.2 72 65.3
Gohir.A11G000150 Gossypium hirsutum HOM05D005360 ORTHO05D026494 1.1e-15 88.2 87 54.0
Gohir.1Z049508 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.4e-14 83.2 87 50.6
SEGI_40723 Sequoiadendron giganteum HOM05D005360 ORTHO05D006501 4.4e-14 82.8 91 46.2
BcaC07g37801 Brassica carinata HOM05D005360 ORTHO05D006501 9.9e-14 81.6 98 42.9
Gohir.A06G133300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.7e-13 80.9 99 47.5
Zm00001eb137350 Zea mays HOM05D005360 ORTHO05D006501 2.2e-13 80.5 83 44.6
SalBow1G4086 Salvia bowleyana HOM05D005360 ORTHO05D006501 7.1e-12 75.5 103 40.8
Gohir.A02G089101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.6e-11 74.3 85 45.9
Eucgr.L03607 Eucalyptus grandis HOM05D005360 ORTHO05D006501 1.3e-10 71.2 49 65.3
Actinidia07196 Actinidia chinensis HOM05D005360 ORTHO05D006501 9.6e-09 65.1 167 29.3
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.0e-07 59.7 48 62.5
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 5.2e-07 59.3 49 63.3
Gohir.A01G109901 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.2e-06 58.2 115 34.8
Zm00001eb350410 Zea mays HOM05D005360 ORTHO05D006501 2.0e-06 57.4 49 46.9
Zm00001eb410990 Zea mays HOM05D005360 ORTHO05D006501 2.0e-06 57.4 49 46.9
Gohir.A01G162600 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.4e-06 56.6 56 51.8


User provided reference genes

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