Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02244 Erythranthe guttata HOM05D001944 ORTHO05D002405 0.0e+00 1868.6 1024 100.0
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 6.6e-48 197.2 881 28.4
MSTRG.18675 Avicennia marina HOM05D001944 ORTHO05D002405 1.2e-46 193.0 1077 27.2
Migut.N02586 Erythranthe guttata HOM05D001944 ORTHO05D002405 1.5e-44 186.0 1053 27.6
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 2.6e-44 185.3 840 27.3
Oeu013469.1 Olea europaea HOM05D001944 ORTHO05D002405 2.4e-34 152.1 878 27.9
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 1.6e-30 139.4 921 25.5
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 7.6e-28 130.6 937 24.9
SalBow3G3117 Salvia bowleyana HOM05D001944 ORTHO05D002405 1.1e-26 126.7 1038 25.0
Oeu056301.1 Olea europaea HOM05D001944 ORTHO05D002405 2.4e-26 125.6 236 39.0
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 9.2e-26 123.6 840 24.6
SGA_v2.0_scaffold180G39633 Striga asiatica HOM05D001944 ORTHO05D002405 4.0e-21 108.2 310 32.9
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 4.4e-20 104.8 949 22.1
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 9.9e-20 103.6 981 24.0
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 9.9e-20 103.6 206 35.4
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 2.9e-19 102.1 890 23.6
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 6.4e-19 100.9 864 23.8
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 8.4e-19 100.5 853 25.4
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 9.3e-18 97.1 945 22.0
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 6.0e-17 94.4 218 35.8
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 2.3e-16 92.4 178 37.1
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 3.0e-16 92.0 330 31.5
Nitab4.5_0006619g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.0e-16 92.0 175 33.7
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 5.1e-16 91.3 162 42.6
Oeu056302.1 Olea europaea HOM05D001944 ORTHO05D002405 6.6e-16 90.9 144 40.3
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.5e-15 89.0 902 22.8
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 3.3e-15 88.6 162 42.0
Oeu002984.1 Olea europaea HOM05D001944 ORTHO05D002405 4.3e-15 88.2 331 28.4
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 7.3e-15 87.4 832 23.2
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 9.6e-15 87.0 175 37.7
SGA_v2.0_scaffold127G34027 Striga asiatica HOM05D001944 ORTHO05D002405 1.6e-14 86.3 166 35.5
CSS0042132 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 2.1e-14 85.9 197 34.5
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.8e-14 85.5 807 22.4
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 4.8e-14 84.7 170 35.3
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 4.8e-14 84.7 847 22.1
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 8.1e-14 84.0 839 22.9
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 4.0e-13 81.6 830 23.4
CSS0007832 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 5.3e-13 81.3 146 36.3
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 5.3e-13 81.3 133 42.1
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 5.3e-13 81.3 778 22.2
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 1.2e-12 80.1 168 36.3
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.2e-12 80.1 170 34.7
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 1.2e-12 80.1 92 46.7
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 1.2e-12 80.1 140 37.9
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 1.2e-12 80.1 388 25.0
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 1.5e-12 79.7 437 26.1
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 2.0e-12 79.3 164 37.8
Actinidia20444 Actinidia chinensis HOM05D001944 ORTHO05D002405 2.6e-12 79.0 92 51.1
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 3.4e-12 78.6 845 23.3
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 3.4e-12 78.6 850 22.6
FAN16G2569 Fragaria x ananassa HOM05D001944 ORTHO05D002405 4.4e-12 78.2 876 24.4
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 7.6e-12 77.4 111 41.4
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 9.9e-12 77.0 815 22.9
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 9.9e-12 77.0 94 44.7
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 9.9e-12 77.0 116 42.2
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 1.3e-11 76.6 262 29.4
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.7e-11 76.3 139 39.6
FvH4_3g31740 Fragaria vesca HOM05D001944 ORTHO05D002405 2.2e-11 75.9 869 23.7
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 4.9e-11 74.7 139 38.8
Lj1A201T36 Lonicera japonica HOM05D001944 ORTHO05D002405 1.4e-10 73.2 90 47.8
Lj1A201T35 Lonicera japonica HOM05D001944 ORTHO05D011318 1.9e-10 72.8 99 44.4
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 2.4e-10 72.4 115 40.0
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 2.4e-10 72.4 896 22.5
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 4.2e-10 71.6 800 22.8
Prupe.6G104700 Prunus persica HOM05D001944 ORTHO05D002405 5.4e-10 71.2 146 35.6
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 7.1e-10 70.9 173 34.1
Ah.01g003060 Amaranthus hybridus HOM05D001944 ORTHO05D002405 9.3e-10 70.5 124 36.3
SGA_v2.0_scaffold116G32253 Striga asiatica HOM05D001944 ORTHO05D002405 9.3e-10 70.5 270 30.4
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 1.6e-09 69.7 157 35.7
vmacro14422 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 1.6e-09 69.7 140 37.1
ECA248G3660 Erigeron canadensis HOM05D001944 ORTHO05D002405 2.1e-09 69.3 459 26.1
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 3.5e-09 68.6 767 22.6
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 6.0e-09 67.8 804 21.4
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 6.0e-09 67.8 130 38.5
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.0e-08 67.0 854 26.6
HanXRQChr01g0019301 Helianthus annuus HOM05D001944 ORTHO05D002405 1.3e-08 66.6 136 36.0
unitig_8.g3297 Utricularia gibba HOM05D001944 ORTHO05D002405 1.3e-08 66.6 199 30.7
ECA248G2414 Erigeron canadensis HOM05D001944 ORTHO05D002405 3.0e-08 65.5 322 27.6
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 3.0e-08 65.5 237 29.1
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 3.9e-08 65.1 875 25.3
AUR62029227 Chenopodium quinoa HOM05D001944 ORTHO05D002405 5.1e-08 64.7 99 38.4
Lalb_Chr19g0137131 Lupinus albus HOM05D001944 ORTHO05D011318 6.6e-08 64.3 370 25.4
HanXRQChr14g0452741 Helianthus annuus HOM05D001944 ORTHO05D002405 8.7e-08 63.9 181 31.5
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 8.7e-08 63.9 333 26.1
CDE02G3605 Ceratophyllum demersum HOM05D001944 ORTHO05D002405 1.1e-07 63.5 119 37.0
HanXRQChr01g0019281 Helianthus annuus HOM05D001944 ORTHO05D002405 1.1e-07 63.5 104 41.3
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 1.1e-07 63.5 149 32.9
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 1.9e-07 62.8 866 24.1
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.9e-07 62.8 239 27.6
Cpa.g.sc311.2 Carica papaya HOM05D001944 ORTHO05D002405 5.6e-07 61.2 868 21.5
DCAR_022760 Daucus carota HOM05D001944 ORTHO05D002405 5.6e-07 61.2 799 23.2
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 5.6e-07 61.2 843 22.2
Sed0024562 Sechium edule HOM05D001944 ORTHO05D002405 5.6e-07 61.2 859 24.1
Atru.chr8.1406 Acer truncatum HOM05D001944 ORTHO05D002405 9.6e-07 60.5 184 29.9
Lsat_1_v5_gn_4_48720 Lactuca sativa HOM05D001944 ORTHO05D002405 1.3e-06 60.1 77 40.3
Peaxi162Scf00948g00114 Petunia axillaris HOM05D001944 ORTHO05D002405 1.3e-06 60.1 848 21.2
Lsat_1_v5_gn_2_98901 Lactuca sativa HOM05D001944 ORTHO05D002405 1.6e-06 59.7 150 30.7
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 3.6e-06 58.5 849 22.0
FvH4_4g08540 Fragaria vesca HOM05D001944 ORTHO05D020674 4.8e-06 58.2 151 32.5
Lsat_1_v5_gn_5_80480 Lactuca sativa HOM05D004045 ORTHO05D002405 4.8e-06 58.2 150 30.7
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 4.8e-06 58.2 865 21.3
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea HOM05D001944 ORTHO05D002405 6.2e-06 57.8 798 22.4
HanXRQChr01g0019291 Helianthus annuus HOM05D001944 ORTHO05D002405 6.2e-06 57.8 84 38.1
unitig_21.g20906 Utricularia gibba HOM05D001944 ORTHO05D002405 6.2e-06 57.8 133 35.3
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 8.1e-06 57.4 876 22.6
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 8.1e-06 57.4 920 20.7
HanXRQChr01g0019271 Helianthus annuus HOM05D001944 ORTHO05D002405 8.1e-06 57.4 161 29.2


User provided reference genes

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