Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 0.0e+00 1166.0 599 100.0
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 1.8e-180 636.7 694 55.9
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 2.6e-160 569.7 691 52.4
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 5.9e-144 515.4 704 47.2
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 2.5e-142 510.0 704 46.9
Migut.O00549 Erythranthe guttata HOM05D005647 ORTHO05D006968 6.6e-135 485.3 277 91.0
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 1.2e-133 481.1 677 45.9
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 7.8e-128 461.8 361 65.7
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.0e-127 461.5 354 68.1
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 2.3e-127 460.3 352 67.3
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 5.0e-127 459.1 670 44.5
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 8.6e-127 458.4 351 67.8
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 7.3e-126 455.3 361 64.8
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 1.6e-125 454.1 351 67.5
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.4e-121 441.0 639 45.4
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 2.3e-119 433.7 403 58.8
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 7.3e-118 428.7 547 47.9
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 8.9e-116 421.8 443 52.6
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 7.6e-115 418.7 366 61.2
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 8.4e-114 415.2 346 62.7
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 8.4e-114 415.2 678 43.2
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 3.2e-113 413.3 339 62.2
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.6e-112 411.0 362 58.8
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 2.1e-112 410.6 518 46.9
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 2.7e-112 410.2 546 46.2
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 4.6e-112 409.5 382 58.4
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.0e-111 408.3 461 49.9
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.7e-111 407.5 385 56.1
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 5.1e-111 406.0 343 61.5
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 3.3e-110 403.3 344 60.2
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 4.7e-109 399.4 638 43.3
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 6.2e-109 399.1 365 58.4
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 1.4e-108 397.9 378 56.6
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.4e-108 397.9 511 48.1
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.8e-108 397.5 344 58.1
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 3.1e-108 396.7 629 42.6
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 3.1e-108 396.7 344 57.0
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 2.0e-107 394.0 318 65.1
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 4.4e-107 392.9 424 52.1
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 3.8e-106 389.8 626 40.9
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.9e-105 387.5 344 59.3
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 1.9e-105 387.5 345 59.1
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 2.4e-105 387.1 407 52.1
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 5.4e-105 386.0 400 51.8
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 5.4e-105 386.0 344 59.0
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 5.4e-105 386.0 344 58.4
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.1e-104 384.0 352 56.0
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 2.7e-104 383.6 404 51.5
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 2.7e-104 383.6 438 48.6
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 3.5e-104 383.3 432 49.8
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.6e-104 382.9 344 58.7
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.6e-104 382.9 344 58.7
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.7e-103 380.9 344 58.4
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 2.3e-103 380.6 429 52.2
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 5.1e-103 379.4 348 55.7
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 6.6e-103 379.0 403 54.1
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 8.7e-103 378.6 344 57.6
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 8.7e-103 378.6 608 42.1
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 1.5e-102 377.9 399 49.6
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 3.3e-102 376.7 341 56.3
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 9.6e-102 375.2 445 47.9
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 2.8e-101 373.6 424 50.2
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 4.8e-101 372.9 613 40.3
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 6.2e-101 372.5 389 53.2
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 4.0e-100 369.8 344 57.3
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 4.0e-100 369.8 460 47.2
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 6.9e-100 369.0 344 55.5
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 6.9e-100 369.0 614 39.4
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.2e-99 368.2 434 47.5
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.6e-99 367.1 341 56.6
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 9.9e-99 365.2 401 50.4
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 1.3e-98 364.8 343 55.1
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 2.2e-98 364.0 572 42.0
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 2.9e-98 363.6 391 49.6
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 6.4e-98 362.5 348 53.2
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 8.4e-98 362.1 505 43.0
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 1.4e-97 361.3 303 61.7
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 3.2e-97 360.1 392 49.2
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 6.0e-96 355.9 346 54.0
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 1.0e-95 355.1 371 53.9
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 3.0e-95 353.6 372 51.9
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.6e-93 347.8 358 51.7
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 1.6e-93 347.8 362 51.7
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 2.8e-93 347.1 406 48.0
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 3.6e-93 346.7 406 48.0
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 3.6e-93 346.7 406 48.0
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 5.3e-92 342.8 367 50.4
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.2e-91 341.7 311 58.2
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.2e-91 341.7 339 53.7
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 1.7e-90 337.8 361 52.1
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 6.4e-90 335.9 352 52.0
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 6.4e-90 335.9 352 52.0
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-89 335.1 352 52.0
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 5.5e-89 332.8 342 51.8
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 1.3e-87 328.2 418 45.2
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.3e-87 328.2 399 45.4
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 2.3e-87 327.4 419 45.1
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 3.9e-87 326.6 308 53.2
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 1.1e-86 325.1 372 47.3
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.5e-86 324.7 399 44.9
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 5.6e-86 322.8 594 37.7
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 8.1e-85 318.9 322 52.5
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 4.0e-84 316.6 484 40.1
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 4.0e-84 316.6 397 47.1
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 9.0e-84 315.5 372 46.8
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 4.2e-81 306.6 638 32.9
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 6.0e-80 302.8 638 33.1
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 5.9e-67 259.6 237 58.2
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 1.4e-65 255.0 205 61.0
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.0e-63 248.8 238 55.9
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.5e-59 235.0 206 57.8
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 3.2e-57 227.3 322 40.7
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.5e-54 218.4 224 48.7
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 1.8e-52 211.5 297 41.8
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 3.5e-51 207.2 357 33.9
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.7e-50 204.9 324 39.5
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 2.0e-38 164.9 472 30.9
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 1.6e-35 155.2 228 41.2
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 3.4e-30 137.5 142 52.8
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 4.4e-30 137.1 123 57.7
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.2e-29 134.8 113 57.5
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 4.9e-29 133.7 435 32.2
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 7.7e-27 126.3 292 33.2
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 1.8e-23 115.2 149 45.0
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 8.9e-23 112.8 128 43.8
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 8.3e-21 106.3 168 33.3
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.8e-20 105.1 86 55.8
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 5.4e-20 103.6 107 50.5
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.8e-15 88.6 62 62.9
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 3.4e-14 84.3 246 26.8
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.2e-13 81.6 82 50.0
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 1.6e-11 75.5 53 69.8
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 1.6e-11 75.5 53 69.8
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 1.5e-09 68.9 56 60.7


User provided reference genes

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