Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02126 Erythranthe guttata HOM05D046984 ORTHO05D011290 2.2e-72 275.4 129 100.0
Migut.D02120 Erythranthe guttata HOM05D000553 ORTHO05D011290 3.0e-16 89.0 101 42.6
Migut.A01056 Erythranthe guttata HOM05D046984 ORTHO05D011290 4.7e-14 81.6 108 41.7
CiPaw.14G071500 Carya illinoinensis HOM05D010595 ORTHO05D011290 1.2e-09 67.0 114 34.2
Actinidia07058 Actinidia chinensis HOM05D010595 ORTHO05D011290 6.0e-09 64.7 97 29.9
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 2.3e-08 62.8 89 31.5
Migut.F00676 Erythranthe guttata HOM05D000553 ORTHO05D000460 3.9e-08 62.0 91 38.5
Eucgr.J00225 Eucalyptus grandis HOM05D000553 ORTHO05D000460 3.9e-08 62.0 120 35.0
Actinidia33930 Actinidia chinensis HOM05D000553 ORTHO05D000460 8.6e-08 60.8 89 40.4
THA.LOC104826855 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 1.1e-07 60.5 99 35.4
TWI09G1557 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 1.1e-07 60.5 89 38.2
Glyma.14G060000 Glycine max HOM05D000553 ORTHO05D000460 1.5e-07 60.1 89 40.4
TWI73G0316 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 1.5e-07 60.1 89 38.2
Actinidia29694 Actinidia chinensis HOM05D000553 ORTHO05D000460 1.9e-07 59.7 91 38.5
arahy.Tifrunner.gnm1.ann1.5I106H Arachis hypogaea HOM05D000553 ORTHO05D000460 1.9e-07 59.7 99 37.4
arahy.Tifrunner.gnm1.ann1.7A6EAY Arachis hypogaea HOM05D000553 ORTHO05D000460 1.9e-07 59.7 99 37.4
BcaB01g00051 Brassica carinata HOM05D000553 ORTHO05D000460 1.9e-07 59.7 133 28.6
Sp3g09510 Schrenkiella parvula HOM05D000553 ORTHO05D000460 1.9e-07 59.7 99 37.4
Atru.chr12.20 Acer truncatum HOM05D000553 ORTHO05D000460 2.5e-07 59.3 89 38.2
Ciclev10033070m.g Citrus clementina HOM05D000553 ORTHO05D000460 2.5e-07 59.3 89 39.3
Sc18g0000990 Simmondsia chinensis HOM05D000553 ORTHO05D000460 2.5e-07 59.3 99 35.4
Migut.F01375 Erythranthe guttata HOM05D000553 ORTHO05D000460 3.3e-07 58.9 99 36.4
BcaB06g25637 Brassica carinata HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
BcaC05g29391 Brassica carinata HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
A05p38070 Brassica napus HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
C05p56860 Brassica napus HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
BolC5t34350H Brassica oleracea HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
BraA05t22599Z Brassica rapa HOM05D000553 ORTHO05D000460 4.3e-07 58.5 99 36.4
CANSAT56G1463 Cannabis sativa HOM05D000553 ORTHO05D000460 4.3e-07 58.5 89 37.1
CANSAT56G3951 Cannabis sativa HOM05D000553 ORTHO05D000460 4.3e-07 58.5 89 37.1
Cfa001329 Carpinus fangiana HOM05D000553 ORTHO05D000460 4.3e-07 58.5 89 39.3
MELO3C025175.2 Cucumis melo HOM05D000553 ORTHO05D000460 4.3e-07 58.5 94 36.2
Glyma.13G176800 Glycine max HOM05D000553 ORTHO05D000460 4.3e-07 58.5 109 38.5
SalBow6G4828 Salvia bowleyana HOM05D000553 ORTHO05D000460 4.3e-07 58.5 89 38.2
VMungo0647G1232 Vigna mungo HOM05D000553 ORTHO05D000460 4.3e-07 58.5 103 36.9
AT2G40110 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 5.6e-07 58.2 90 35.6
arahy.Tifrunner.gnm1.ann1.K8NNXW Arachis hypogaea HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 38.2
MSTRG.210 Avicennia marina HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 39.3
A03p36990 Brassica napus HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 38.2
BraA03t12861Z Brassica rapa HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 38.2
Thhalv10021761m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 5.6e-07 58.2 99 35.4
Glyma.02G256700 Glycine max HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 39.3
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 5.6e-07 58.2 99 32.3
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 5.6e-07 58.2 99 32.3
THA.LOC104816552 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 37.1
TPR.G2519 Trifolium pratense HOM05D000553 ORTHO05D000460 5.6e-07 58.2 89 39.3
Actinidia06500 Actinidia chinensis HOM05D010595 ORTHO05D011290 7.3e-07 57.8 73 39.7
BcaB04g21142 Brassica carinata HOM05D000553 ORTHO05D000460 7.3e-07 57.8 99 37.4
BolC1t05326H Brassica oleracea HOM05D000553 ORTHO05D000460 7.3e-07 57.8 89 39.3
CARHR085790 Cardamine hirsuta HOM05D000553 ORTHO05D000460 7.3e-07 57.8 99 37.4
TWI77G0351 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 7.3e-07 57.8 89 33.7
AT3G11230 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 9.5e-07 57.4 99 35.4
BcaC09g48161 Brassica carinata HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 39.3
BraA01t04193Z Brassica rapa HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 39.3
Cpa.g.sc19.186 Carica papaya HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 38.2
FAN03G2890 Fragaria x ananassa HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 38.2
Peaxi162Scf01208g00149 Petunia axillaris HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 38.2
RcHm_v2.0_Chr1g0370001 Rosa chinensis HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 38.2
Sc11g0005000 Simmondsia chinensis HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 38.2
TAR636G2882 Trochodendron aralioides HOM05D000553 ORTHO05D000460 9.5e-07 57.4 89 39.3
VMungo0251G1940 Vigna mungo HOM05D000553 ORTHO05D000460 9.5e-07 57.4 108 37.0
Aa31LG10G10850 Aethionema arabicum HOM05D000553 ORTHO05D000460 1.2e-06 57.0 91 35.2
MSTRG.10224 Avicennia marina HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
BcaC01g04134 Brassica carinata HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
C03p44780 Brassica napus HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
BolC3t16741H Brassica oleracea HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
CSS0025442 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 39.3
Dinv34394 Davidia involucrata HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 39.3
ECA238G1851 Erigeron canadensis HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 36.0
Glyma.07G199600 Glycine max HOM05D000553 ORTHO05D000460 1.2e-06 57.0 109 37.6
Lalb_Chr10g0105121 Lupinus albus HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 37.1
Nitab4.5_0001455g0060 Nicotiana tabacum HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
Phvul.008G224700 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 38.2
Prupe.2G248800 Prunus persica HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 37.1
Rhsim09G0176700 Rhododendron simsii HOM05D000553 ORTHO05D000460 1.2e-06 57.0 89 37.1
PGSC0003DMG400015367 Solanum tuberosum HOM05D000553 ORTHO05D000460 1.2e-06 57.0 113 32.7
Actinidia37231 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.6e-06 56.6 95 33.7
Duzib106G1055 Durio zibethinus HOM05D000553 ORTHO05D000460 1.6e-06 56.6 89 37.1
Lalb_Chr17g0346741 Lupinus albus HOM05D000553 ORTHO05D000460 1.6e-06 56.6 97 35.1
MD12G1165000 Malus domestica HOM05D000553 ORTHO05D000460 1.6e-06 56.6 89 36.0
Potri.008G067100 Populus trichocarpa HOM05D000553 ORTHO05D000460 1.6e-06 56.6 89 38.2
Hund15946 Selenicereus undatus HOM05D000553 ORTHO05D000460 1.6e-06 56.6 89 37.1
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.6e-06 56.6 120 35.8
Solyc12g013920.2 Solanum lycopersicum HOM05D000553 ORTHO05D000460 1.6e-06 56.6 113 32.7
Sopen12g005680 Solanum pennellii HOM05D000553 ORTHO05D000460 1.6e-06 56.6 113 32.7
Actinidia13931 Actinidia chinensis HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 38.2
AL4G37760 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 34.8
Carub.0004s2228 Capsella rubella HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 34.8
CARHR135080 Cardamine hirsuta HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 36.0
CDE02G4112 Ceratophyllum demersum HOM05D000553 ORTHO05D000460 2.1e-06 56.2 98 35.7
HanXRQChr08g0222131 Helianthus annuus HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 38.2
HanXRQChr12g0370521 Helianthus annuus HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 38.2
Potri.010G190000 Populus trichocarpa HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 38.2
Thecc.10G020500 Theobroma cacao HOM05D000553 ORTHO05D000460 2.1e-06 56.2 89 37.1
AL3G22750 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 2.8e-06 55.8 99 34.3
BcaB01g00054 Brassica carinata HOM05D000553 ORTHO05D000460 2.8e-06 55.8 92 33.7
BcaB06g29128 Brassica carinata HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 34.8
BcaC02g07353 Brassica carinata HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 34.8
A04p30060 Brassica napus HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 34.8
A09p48870 Brassica napus HOM05D000553 ORTHO05D000460 2.8e-06 55.8 92 33.7
C04p67790 Brassica napus HOM05D000553 ORTHO05D003668 2.8e-06 55.8 89 34.8
C08p31210 Brassica napus HOM05D000553 ORTHO05D000460 2.8e-06 55.8 92 33.7
BolC4t28283H Brassica oleracea HOM05D000553 ORTHO05D003668 2.8e-06 55.8 89 34.8
BolC8t50744H Brassica oleracea HOM05D000553 ORTHO05D000015 2.8e-06 55.8 92 33.7
BraA04t18500Z Brassica rapa HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 34.8
BraA09t40342Z Brassica rapa HOM05D000553 ORTHO05D000460 2.8e-06 55.8 92 33.7
MELO3C008289.2 Cucumis melo HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 36.0
CsaV3_6G001750 Cucumis sativus L. HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 36.0
FvH4_7g24340 Fragaria vesca HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 37.1
FAN06G1361 Fragaria x ananassa HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 37.1
Gohir.D13G016900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 36.0
Medtr3g070330 Medicago truncatula HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 37.1
Peaxi162Scf00825g00027 Petunia axillaris HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 37.1
Rhsim03G0142200 Rhododendron simsii HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 38.2
Sc10g0002290 Simmondsia chinensis HOM05D000553 ORTHO05D000460 2.8e-06 55.8 92 34.8
TAR636G2175 Trochodendron aralioides HOM05D000553 ORTHO05D000460 2.8e-06 55.8 89 38.2
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.6e-06 55.5 75 33.3
arahy.Tifrunner.gnm1.ann1.F9T2J1 Arachis hypogaea HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 36.0
CSS0040155 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 38.2
CiPaw.01G297500 Carya illinoinensis HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 37.1
CiPaw.02G191700 Carya illinoinensis HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 37.1
Cc02_g06640 Coffea canephora HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 37.1
Cc05_g11760 Coffea canephora HOM05D000553 ORTHO05D000460 3.6e-06 55.5 113 32.7
Gorai.013G018700 Gossypium raimondii HOM05D000553 ORTHO05D000460 3.6e-06 55.5 90 34.4
Hma1.2p1_0446F.1_g154560 Hydrangea macrophylla HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 39.3
Lj6g0002024 Lotus japonicus HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 34.8
Psat3g129640 Pisum sativum HOM05D000553 ORTHO05D000460 3.6e-06 55.5 96 38.5
Sp4g22420 Schrenkiella parvula HOM05D000553 ORTHO05D000460 3.6e-06 55.5 91 36.3
Solyc09g014500.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 34.8
Sopen09g007330 Solanum pennellii HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 34.8
THA.LOC104816207 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 36.0
HPP92_015496 Vanilla planifolia HOM05D000553 ORTHO05D000460 3.6e-06 55.5 89 32.6
Actinidia20728 Actinidia chinensis HOM05D000553 ORTHO05D000460 4.7e-06 55.1 92 37.0
CSS0015883 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 37.1
Cfa017215 Carpinus fangiana HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 34.8
Ca_15269_v3 Cicer arietinum L. HOM05D000553 ORTHO05D003668 4.7e-06 55.1 89 37.1
Gohir.A05G329500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 34.8
Gohir.D04G067500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 34.8
Lalb_Chr04g0250621 Lupinus albus HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 34.8
Manes.08G091500 Manihot esculenta HOM05D000553 ORTHO05D000460 4.7e-06 55.1 111 34.2
Nitab4.5_0000119g0190 Nicotiana tabacum HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 37.1
Phvul.002G230900 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 4.7e-06 55.1 108 36.1
Sp3g07410 Schrenkiella parvula HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 36.0
Hund13849 Selenicereus undatus HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 37.1
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 4.7e-06 55.1 86 38.4
GSVIVG01032842001 Vitis vinifera HOM05D000553 ORTHO05D000460 4.7e-06 55.1 89 36.0
arahy.Tifrunner.gnm1.ann1.DT1206 Arachis hypogaea HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 36.0
Carub.0003s1054 Capsella rubella HOM05D000553 ORTHO05D000460 6.2e-06 54.7 99 33.3
CiPaw.09G208400 Carya illinoinensis HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 36.0
ClCG11G006240 Citrullus lanatus HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 34.8
ECA238G0248 Erigeron canadensis HOM05D000553 ORTHO05D000460 6.2e-06 54.7 96 35.4
Thhalv10017415m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 34.8
FAN01G1959 Fragaria x ananassa HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 37.1
Gohir.A13G015800 Gossypium hirsutum HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 37.1
HanXRQChr10g0293791 Helianthus annuus HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 34.8
MD04G1151100 Malus domestica HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 33.7
Medtr4g088505 Medicago truncatula HOM05D000553 ORTHO05D000460 6.2e-06 54.7 108 36.1
PGSC0003DMG400011933 Solanum tuberosum HOM05D000553 ORTHO05D000460 6.2e-06 54.7 89 38.2
Aa31LG5G19490 Aethionema arabicum HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 34.8
CARHR083330 Cardamine hirsuta HOM05D000553 ORTHO05D000460 8.1e-06 54.3 90 35.6
COL.COLO4_36714 Corchorus olitorius HOM05D000553 ORTHO05D000460 8.1e-06 54.3 113 33.6
DCAR_011805 Daucus carota HOM05D000553 ORTHO05D000460 8.1e-06 54.3 96 35.4
Duzib114G0020 Durio zibethinus HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 36.0
ECA233G6106 Erigeron canadensis HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 37.1
Glyma.18G028500 Glycine max HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 34.8
LjContig00357g0010180 Lotus japonicus HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 37.1
Lalb_Chr01g0006601 Lupinus albus HOM05D000553 ORTHO05D000460 8.1e-06 54.3 111 33.3
MBI05_g34497_MAGBIO Magnolia biondii HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 37.1
Potri.016G115000 Populus trichocarpa HOM05D000553 ORTHO05D000460 8.1e-06 54.3 91 38.5
Sed0019405 Sechium edule HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 33.7
Solyc03g096250.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 37.1
Solyc10g076750.2 Solanum lycopersicum HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 36.0
Sopen10g028390 Solanum pennellii HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 36.0
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 8.1e-06 54.3 94 35.1
TAR623G0400 Trochodendron aralioides HOM05D000553 ORTHO05D000460 8.1e-06 54.3 89 37.1


User provided reference genes

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