Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.0e-203 712.2 357 100.0
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 8.3e-202 706.8 354 99.7
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.4e-201 705.3 354 99.4
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 5.8e-171 604.4 357 84.6
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.7e-170 602.8 353 83.9
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 7.8e-168 594.0 357 83.2
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 3.3e-166 588.6 357 82.6
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.6e-165 586.3 357 81.5
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 3.1e-164 582.0 358 81.8
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 3.1e-164 582.0 358 81.6
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 2.9e-162 575.5 355 81.1
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 4.9e-162 574.7 347 82.1
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 1.4e-161 573.2 357 79.8
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 1.6e-160 569.7 348 81.6
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 3.5e-160 568.5 349 81.7
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 6.6e-159 564.3 352 79.3
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 1.5e-158 563.1 377 75.6
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 1.9e-158 562.8 358 77.4
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 2.5e-158 562.4 358 78.8
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 9.6e-158 560.5 355 78.9
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 1.6e-157 559.7 355 78.9
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 2.1e-157 559.3 356 77.5
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 3.6e-157 558.5 346 79.8
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 6.2e-157 557.8 356 76.7
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 3.1e-156 555.4 357 76.8
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 5.3e-156 554.7 355 77.2
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 6.9e-156 554.3 356 76.4
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 9.0e-156 553.9 355 76.6
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.2e-155 553.5 355 77.2
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 1.5e-155 553.1 351 77.2
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 2.6e-155 552.4 355 76.3
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 3.4e-155 552.0 352 76.7
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 4.5e-155 551.6 356 75.8
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 5.8e-155 551.2 356 77.5
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 5.8e-155 551.2 356 77.2
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 5.8e-155 551.2 356 77.2
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 7.6e-155 550.8 355 76.6
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 9.9e-155 550.4 353 76.5
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 9.9e-155 550.4 352 77.8
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 1.3e-154 550.1 354 77.7
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 2.2e-154 549.3 355 75.8
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 2.9e-154 548.9 360 76.9
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 2.9e-154 548.9 353 75.6
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 4.9e-154 548.1 366 75.7
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 6.4e-154 547.7 353 75.4
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 1.9e-153 546.2 353 75.4
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 1.9e-153 546.2 353 75.4
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 1.9e-153 546.2 353 75.4
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 2.4e-153 545.8 353 75.4
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 2.4e-153 545.8 352 77.3
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 4.2e-153 545.0 355 76.6
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 7.1e-153 544.3 349 76.8
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 9.3e-153 543.9 353 75.1
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 1.2e-152 543.5 353 77.1
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 2.7e-152 542.3 344 79.9
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 2.7e-152 542.3 355 76.3
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 2.7e-152 542.3 356 75.6
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 6.0e-152 541.2 384 71.9
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 6.0e-152 541.2 357 76.2
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 6.0e-152 541.2 353 76.5
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 1.3e-151 540.0 355 76.6
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 5.1e-151 538.1 357 76.5
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 8.7e-151 537.3 350 76.3
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 1.5e-150 536.6 358 74.0
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 1.9e-150 536.2 352 75.6
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 2.5e-150 535.8 355 75.2
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 9.6e-150 533.9 349 75.9
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 1.1e-148 530.4 355 75.5
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 2.4e-148 529.3 354 73.4
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 9.0e-148 527.3 356 73.6
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.0e-147 526.2 354 73.2
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 4.5e-147 525.0 356 74.2
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 9.9e-147 523.9 350 74.9
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 9.9e-147 523.9 328 82.6
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 2.2e-146 522.7 351 74.1
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 2.2e-146 522.7 360 71.9
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 1.6e-144 516.5 372 70.2
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 1.6e-144 516.5 357 70.6
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 4.6e-144 515.0 355 73.8
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 4.6e-144 515.0 352 72.4
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 4.6e-144 515.0 360 71.4
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 7.9e-144 514.2 349 72.5
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 1.3e-143 513.5 342 75.4
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 3.3e-142 508.8 359 70.2
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 1.8e-140 503.1 377 69.0
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 1.0e-138 497.3 355 69.9
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 4.2e-137 491.9 302 77.5
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 7.1e-137 491.1 348 68.4
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 6.0e-136 488.0 395 65.1
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 8.7e-135 484.2 357 70.0
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 2.5e-134 482.6 329 73.9
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 4.3e-134 481.9 382 65.7
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.3e-133 480.3 327 75.8
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 2.6e-131 472.6 340 67.4
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 5.0e-130 468.4 302 73.8
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 5.5e-129 464.9 306 76.1
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 1.6e-128 463.4 298 80.2
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 2.1e-128 463.0 347 70.9
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 5.1e-127 458.4 317 73.2
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 6.7e-127 458.0 348 70.1
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 1.1e-126 457.2 346 69.7
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 1.5e-126 456.8 298 78.5
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.9e-126 456.4 347 70.0
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 4.3e-126 455.3 295 74.6
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 4.3e-126 455.3 279 78.5
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 6.9e-124 448.0 357 66.1
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 1.0e-122 444.1 259 83.0
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 2.1e-120 436.4 259 81.1
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 5.1e-119 431.8 298 73.2
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 6.3e-117 424.9 300 71.7
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 3.8e-114 415.6 316 69.0
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 3.6e-112 409.1 355 60.8
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 7.9e-112 407.9 300 69.0
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 6.7e-111 404.8 296 69.3
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 5.7e-110 401.7 236 80.9
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 3.6e-104 382.5 343 55.1
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 1.8e-103 380.2 265 75.1
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 4.0e-103 379.0 386 57.0
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 5.2e-103 378.6 255 75.7
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 5.2e-103 378.6 343 54.5
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 2.7e-99 366.3 249 77.5
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 1.0e-98 364.4 336 54.2
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 1.3e-98 364.0 234 79.9
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.1e-97 360.9 256 74.2
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 1.5e-97 360.5 349 51.9
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 5.5e-97 358.6 261 72.8
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 1.4e-95 354.0 302 62.9
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 4.8e-93 345.5 253 71.1
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 2.7e-91 339.7 289 55.4
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.1e-89 334.3 195 82.6
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 2.4e-84 316.6 218 75.7
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 1.6e-80 303.9 341 46.9
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.2e-78 297.7 230 67.4
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 5.9e-75 285.4 195 72.3
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.2e-67 261.2 371 44.2
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.8e-55 220.7 159 69.8
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 9.9e-54 214.9 187 61.5
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 7.8e-43 178.7 171 58.5
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 7.1e-36 155.6 103 73.8
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 8.1e-32 142.1 78 83.3
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 1.4e-31 141.4 79 83.5
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 1.8e-31 141.0 78 82.1
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 1.8e-31 141.0 78 82.1
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 4.0e-31 139.8 78 83.3
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 9.3e-28 128.6 63 88.9
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 1.1e-25 121.7 136 52.9
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 6.7e-18 95.9 94 53.2
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 6.3e-08 62.8 46 63.0
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 1.4e-07 61.6 40 75.0
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 3.1e-07 60.5 51 56.9
Lj1A771T12 Lonicera japonica HOM05D024127 ORTHO05D025733 9.1e-07 58.9 37 67.6


User provided reference genes

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