Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 3.6e-92 341.7 183 100.0
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 4.1e-56 221.9 191 69.6
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 1.4e-48 196.8 188 63.3
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 6.0e-47 191.4 185 58.4
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 6.0e-47 191.4 185 58.4
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 6.0e-47 191.4 185 58.4
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 6.6e-46 188.0 180 58.9
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 2.5e-45 186.0 189 55.6
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 3.3e-45 185.7 180 56.1
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 4.7e-44 181.8 180 56.7
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 8.1e-44 181.0 184 63.0
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 1.8e-43 179.9 186 56.5
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.2e-42 177.2 186 57.5
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 7.6e-42 174.5 186 54.8
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 6.4e-41 171.4 191 53.4
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 1.1e-40 170.6 187 56.1
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 2.4e-40 169.5 188 52.7
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 3.5e-39 165.6 183 56.3
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 3.9e-38 162.2 186 52.7
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 5.1e-38 161.8 189 51.9
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 5.1e-38 161.8 187 54.5
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 1.1e-37 160.6 187 54.0
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 1.9e-37 159.8 178 53.9
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 2.5e-37 159.5 187 49.7
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 3.3e-37 159.1 186 53.2
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 3.3e-37 159.1 179 53.6
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 7.3e-37 157.9 189 52.9
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.6e-36 156.8 188 50.0
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 2.8e-36 156.0 191 52.4
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 3.6e-36 155.6 190 52.1
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 4.8e-36 155.2 187 49.2
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 4.8e-36 155.2 181 49.2
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 6.2e-36 154.8 189 51.3
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 8.1e-36 154.5 187 50.8
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 8.1e-36 154.5 188 53.2
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 1.1e-35 154.1 189 51.3
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.4e-35 153.7 189 52.4
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 4.0e-35 152.1 180 53.3
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 9.0e-35 151.0 183 53.0
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 1.5e-34 150.2 178 51.1
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 2.0e-34 149.8 189 49.2
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 2.6e-34 149.4 185 53.0
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 2.6e-34 149.4 189 51.9
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 3.4e-34 149.1 177 53.7
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 4.5e-34 148.7 186 48.4
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 4.5e-34 148.7 189 51.3
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 5.8e-34 148.3 187 49.7
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 1.3e-33 147.1 187 49.7
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 1.7e-33 146.7 202 51.0
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.2e-33 146.4 185 51.9
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 2.2e-33 146.4 187 48.7
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 2.9e-33 146.0 178 52.2
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.9e-33 146.0 188 52.1
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 2.9e-33 146.0 180 47.2
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 3.8e-33 145.6 187 50.8
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 3.8e-33 145.6 189 49.2
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 4.9e-33 145.2 184 47.8
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 4.9e-33 145.2 190 50.0
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 6.4e-33 144.8 188 48.4
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 8.4e-33 144.4 180 51.1
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 2.4e-32 142.9 188 49.5
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 3.2e-32 142.5 185 49.7
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 5.4e-32 141.7 180 51.7
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 5.4e-32 141.7 184 48.4
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 4.6e-31 138.7 187 47.1
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 6.0e-31 138.3 187 45.5
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 7.9e-31 137.9 193 50.3
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 1.3e-30 137.1 188 47.3
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 5.1e-30 135.2 182 50.0
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 5.1e-30 135.2 187 48.1
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.9e-29 133.3 180 48.3
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.9e-29 133.3 180 48.3
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.3e-29 132.5 206 47.6
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 4.3e-29 132.1 184 48.4
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 5.6e-29 131.7 180 47.8
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 9.6e-29 131.0 182 47.8
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.3e-28 130.6 184 47.8
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.3e-28 130.6 175 48.0
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 1.6e-28 130.2 180 47.2
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 1.1e-27 127.5 190 47.4
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 2.4e-27 126.3 182 48.4
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 5.3e-27 125.2 188 47.9
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 6.9e-27 124.8 176 44.9
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 9.0e-27 124.4 196 45.4
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 9.0e-27 124.4 187 48.1
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 2.6e-26 122.9 185 47.0
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 3.4e-26 122.5 189 45.5
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 3.4e-26 122.5 183 46.4
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 5.8e-26 121.7 172 51.7
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 2.9e-25 119.4 185 45.9
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 4.9e-25 118.6 184 45.7
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 6.4e-25 118.2 183 45.4
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.4e-24 117.1 172 50.6
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.9e-24 116.7 177 42.4
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 2.1e-23 113.2 191 44.0
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 2.7e-23 112.8 181 40.3
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 2.7e-23 112.8 172 50.0
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 3.5e-23 112.5 97 61.9
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 4.6e-23 112.1 181 45.9
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 7.9e-23 111.3 196 40.8
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 3.0e-22 109.4 188 42.6
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 8.7e-22 107.8 181 43.6
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 8.7e-22 107.8 181 43.6
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 8.7e-22 107.8 181 43.6
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 1.1e-21 107.5 187 43.3
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 1.5e-21 107.1 186 43.0
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 1.5e-21 107.1 102 55.9
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 3.3e-21 105.9 187 41.2
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 5.6e-21 105.1 186 41.9
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 9.6e-21 104.4 188 42.0
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.1e-20 103.2 189 43.9
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 4.0e-19 99.0 171 40.9
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 5.3e-19 98.6 176 44.3
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 5.8e-18 95.1 136 49.3
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 1.3e-17 94.0 226 36.7
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 2.9e-17 92.8 75 62.7
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 2.9e-17 92.8 167 43.7
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 2.5e-16 89.7 161 41.0
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 9.3e-16 87.8 161 40.4
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 7.9e-15 84.7 155 41.3
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 7.9e-15 84.7 82 61.0
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 3.0e-14 82.8 155 40.0
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 1.3e-12 77.4 163 36.8
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 2.8e-12 76.3 138 39.1
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 1.8e-11 73.6 141 43.3
CSS0021101 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 2.4e-11 73.2 72 59.7
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 5.3e-11 72.0 183 36.1
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 1.2e-10 70.9 137 41.6
Lalb_Chr01g0003571 Lupinus albus HOM05D004998 ORTHO05D006104 3.4e-10 69.3 138 36.2
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 5.9e-10 68.6 139 39.6
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 2.2e-09 66.6 59 61.0
BcaB01g04577 Brassica carinata HOM05D004998 ORTHO05D006104 1.1e-08 64.3 199 33.2
BcaC01g06521 Brassica carinata HOM05D004998 ORTHO05D006104 1.1e-08 64.3 179 35.8
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.4e-08 63.9 188 32.4
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 3.2e-08 62.8 186 33.3
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 7.2e-08 61.6 188 31.9
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 1.2e-07 60.8 182 33.5
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 6.1e-07 58.5 192 29.7
BcaC09g48433 Brassica carinata HOM05D004998 ORTHO05D006104 1.8e-06 57.0 217 32.3


User provided reference genes

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