Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 4.7e-75 284.6 167 100.0
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 9.3e-47 190.7 165 72.7
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 2.3e-45 186.0 151 66.9
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 3.9e-45 185.3 161 70.8
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 2.2e-43 179.5 165 61.2
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.2e-43 179.5 164 65.9
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 8.2e-43 177.6 164 65.9
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.1e-42 177.2 161 60.9
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.1e-42 177.2 161 60.9
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 4.1e-42 175.3 161 60.9
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 5.3e-42 174.9 167 57.5
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 6.9e-42 174.5 166 58.4
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 9.0e-42 174.1 154 61.0
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.2e-41 173.7 159 63.5
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.2e-41 173.7 154 59.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.2e-41 173.7 166 58.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.2e-41 173.7 166 58.4
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.5e-41 173.3 144 63.9
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.5e-41 173.3 153 60.1
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.5e-41 173.3 164 59.8
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.0e-41 172.9 158 60.1
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 3.4e-41 172.2 150 62.0
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 3.4e-41 172.2 163 58.3
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 3.4e-41 172.2 158 60.8
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 4.5e-41 171.8 154 61.7
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 4.5e-41 171.8 169 60.4
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 5.9e-41 171.4 154 60.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.2e-40 169.5 161 59.0
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.2e-40 169.5 159 60.4
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.9e-40 169.1 158 58.9
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.9e-40 169.1 147 60.5
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 3.8e-40 168.7 158 58.9
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 3.8e-40 168.7 163 65.6
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.5e-40 167.9 148 59.5
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.5e-40 167.9 148 59.5
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 8.5e-40 167.5 154 59.7
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.1e-39 167.2 173 65.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 1.1e-39 167.2 147 62.6
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.1e-39 167.2 146 61.6
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.4e-39 166.8 164 58.5
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.9e-39 166.4 163 58.3
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 2.5e-39 166.0 158 58.9
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.2e-39 164.5 160 61.9
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 7.2e-39 164.5 152 59.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 9.3e-39 164.1 169 58.0
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.2e-38 163.7 158 58.2
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.1e-38 162.9 169 57.4
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.1e-38 162.9 164 58.5
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.7e-38 162.5 143 61.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.7e-38 162.5 155 58.1
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.7e-38 162.5 156 57.1
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 4.6e-38 161.8 162 53.7
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 4.6e-38 161.8 152 59.9
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 6.1e-38 161.4 160 68.8
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.9e-38 161.0 164 65.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 3.0e-37 159.1 159 55.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 3.0e-37 159.1 167 60.5
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 1.1e-36 157.1 150 60.7
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 1.9e-36 156.4 166 54.8
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 2.5e-36 156.0 159 57.2
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 2.5e-36 156.0 161 58.4
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 9.7e-36 154.1 159 54.7
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 6.3e-35 151.4 162 56.8
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 6.3e-35 151.4 163 52.8
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 8.2e-35 151.0 159 56.6
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.1e-34 150.6 168 54.8
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.8e-34 149.8 160 55.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.8e-34 149.8 167 53.3
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.4e-34 149.4 160 62.5
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 4.1e-34 148.7 162 53.1
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 5.3e-34 148.3 160 54.4
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 2.0e-33 146.4 164 58.5
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 3.4e-33 145.6 95 74.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 7.7e-33 144.4 147 70.7
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.0e-32 144.1 164 58.5
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.3e-32 143.7 102 70.6
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 2.2e-32 142.9 154 55.2
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 3.8e-32 142.1 162 64.8
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 3.8e-32 142.1 161 57.1
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 5.0e-32 141.7 146 55.5
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.1e-31 140.6 161 62.1
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.5e-31 139.4 158 51.9
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 4.2e-31 138.7 164 57.9
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 4.2e-31 138.7 165 53.9
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 5.5e-31 138.3 161 51.6
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.1e-30 136.3 85 75.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 3.6e-30 135.6 158 58.9
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 2.3e-29 132.9 158 51.3
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 5.1e-29 131.7 163 50.3
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.1e-28 130.6 163 46.6
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 5.7e-28 128.3 154 51.3
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 2.8e-27 125.9 158 50.0
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.8e-27 125.2 163 48.5
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 4.8e-27 125.2 163 47.9
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 4.8e-27 125.2 163 47.9
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.8e-27 125.2 163 48.5
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 3.1e-26 122.5 147 57.8
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 8.5e-24 114.4 86 68.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 3.2e-23 112.5 84 69.0
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 7.2e-23 111.3 177 44.6
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.2e-22 110.5 162 43.8
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.2e-22 110.5 176 42.0
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.6e-22 110.2 144 45.8
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.1e-22 109.8 150 43.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.1e-22 109.8 166 44.0
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-22 109.4 151 45.0
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-22 109.4 158 43.7
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.1e-22 108.2 152 44.7
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 8.0e-22 107.8 85 67.1
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.5e-20 103.6 145 44.1
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 2.0e-20 103.2 154 44.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.8e-19 99.4 135 45.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 8.2e-19 97.8 122 57.4
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 5.3e-18 95.1 94 53.2
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.3e-18 95.1 115 47.8
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 7.0e-18 94.7 144 41.0
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 7.0e-18 94.7 95 55.8
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 4.5e-17 92.0 98 51.0
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 1.2e-14 84.0 147 40.8
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 4.7e-14 82.0 120 43.3
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 6.7e-13 78.2 107 45.8
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.4e-10 69.7 53 64.2
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 4.5e-09 65.5 94 42.6


User provided reference genes

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