Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 6.1e-49 197.2 103 100.0
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.2e-39 166.4 103 84.5
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 3.7e-38 161.4 103 83.5
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.1e-33 145.6 104 75.0
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 6.2e-33 144.1 95 80.0
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 1.2e-31 139.8 102 74.5
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 2.6e-31 138.7 102 72.5
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.7e-30 136.0 103 72.8
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.2e-30 135.6 109 67.0
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 2.9e-30 135.2 109 66.1
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.7e-30 134.8 103 71.8
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 3.7e-30 134.8 103 71.8
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 3.7e-30 134.8 103 71.8
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 6.4e-30 134.0 109 66.1
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 8.3e-30 133.7 105 68.6
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.1e-29 133.3 100 74.0
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.4e-29 132.9 109 66.1
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.9e-29 132.5 103 70.9
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 2.4e-29 132.1 102 66.7
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 68.3
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 3.2e-29 131.7 99 71.7
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 5.4e-29 131.0 104 64.4
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 7.1e-29 130.6 102 68.6
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 2.7e-28 128.6 104 67.3
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 2.3e-27 125.6 100 64.0
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 2.3e-27 125.6 105 64.8
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 2.3e-27 125.6 104 63.5
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 3.0e-27 125.2 103 67.0
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.9e-27 124.8 105 65.7
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 5.1e-27 124.4 100 67.0
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 8.6e-27 123.6 105 63.8
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 8.6e-27 123.6 104 63.5
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 8.6e-27 123.6 99 67.7
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.1e-26 123.2 102 65.7
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.1e-26 123.2 105 64.8
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 1.5e-26 122.9 102 65.7
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.5e-26 122.9 105 64.8
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 1.5e-26 122.9 104 66.3
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 1.5e-26 122.9 104 64.4
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.9e-26 122.5 102 64.7
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.9e-26 122.5 105 64.8
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 2.5e-26 122.1 103 64.1
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.5e-26 122.1 102 65.7
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-26 122.1 102 65.7
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-26 122.1 102 65.7
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.5e-26 122.1 102 65.7
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 2.5e-26 122.1 106 66.0
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 3.3e-26 121.7 104 62.5
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 3.3e-26 121.7 108 63.9
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 3.3e-26 121.7 102 62.7
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 4.3e-26 121.3 102 64.7
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 5.6e-26 120.9 102 64.7
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 5.6e-26 120.9 109 61.5
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 5.6e-26 120.9 104 63.5
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 7.3e-26 120.6 102 62.7
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 7.3e-26 120.6 104 61.5
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 1.2e-25 119.8 102 63.7
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.2e-25 119.8 104 63.5
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 1.6e-25 119.4 104 62.5
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 2.8e-25 118.6 103 64.1
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 4.7e-25 117.9 107 58.9
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 6.2e-25 117.5 105 60.0
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 8.1e-25 117.1 102 63.7
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.1e-24 116.7 104 60.6
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.4e-24 116.3 105 59.0
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.8e-24 115.9 96 63.5
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 4.0e-24 114.8 100 64.0
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 5.2e-24 114.4 102 60.8
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.5e-23 112.8 105 57.1
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.5e-23 112.8 102 58.8
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 2.0e-23 112.5 106 58.5
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 7.6e-23 110.5 104 60.6
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 7.6e-23 110.5 122 55.7
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 7.6e-23 110.5 104 57.7
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 1.3e-22 109.8 104 58.7
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 1.3e-22 109.8 103 59.2
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 3.8e-22 108.2 100 60.0
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 3.8e-22 108.2 104 56.7
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 3.8e-22 108.2 101 57.4
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 6.4e-22 107.5 95 64.2
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 6.4e-22 107.5 107 57.9
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 1.1e-21 106.7 104 56.7
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 3.2e-21 105.1 103 55.3
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 6.0e-20 100.9 81 70.4
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 1.7e-19 99.4 107 51.4
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 2.3e-19 99.0 70 77.1
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 6.6e-19 97.4 70 75.7
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 6.6e-19 97.4 87 62.1
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 6.6e-19 97.4 67 76.1
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.5e-18 96.3 113 48.7
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 9.6e-18 93.6 106 56.6
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.3e-17 93.2 67 71.6
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.3e-17 93.2 67 74.6
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 1.3e-17 93.2 64 75.0
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 2.1e-17 92.4 67 74.6
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.4e-16 89.7 103 52.4
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.4e-16 89.0 66 71.2
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 3.1e-16 88.6 61 77.0
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 2.0e-15 85.9 53 84.9
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 2.6e-15 85.5 68 69.1
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 5.8e-15 84.3 68 61.8
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 6.4e-14 80.9 50 84.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 1.1e-13 80.1 52 80.8
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.9e-13 79.3 50 82.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.2e-13 78.6 56 76.8
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.5e-12 75.1 53 71.7
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 6.9e-08 60.8 39 79.5
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 7.6e-07 57.4 104 34.6


User provided reference genes

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