Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.3e-194 681.0 316 100.0
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.7e-162 573.5 291 91.8
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 3.0e-155 552.0 317 80.1
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.0e-150 537.0 317 76.0
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 2.6e-146 522.3 317 74.8
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 4.4e-146 521.5 318 74.8
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 4.8e-145 518.1 317 73.5
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 6.3e-145 517.7 317 73.8
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.1e-144 516.9 300 83.3
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.3e-144 514.6 317 73.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 7.0e-144 514.2 318 73.3
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 9.1e-144 513.8 318 73.3
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.0e-143 512.7 311 73.3
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 7.7e-143 510.8 318 71.7
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.0e-142 510.4 306 74.2
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.7e-142 509.6 316 72.5
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.2e-142 509.2 319 74.3
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 2.2e-142 509.2 317 73.5
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.9e-142 508.8 317 73.5
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 5.0e-142 508.1 317 72.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 71.7
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 7.2e-141 504.2 307 74.3
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-140 503.4 317 72.9
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-140 503.4 317 72.9
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.6e-140 501.9 318 72.6
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.0e-140 500.7 318 72.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 8.0e-140 500.7 318 72.3
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 1.0e-139 500.4 318 70.4
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.4e-139 500.0 318 70.1
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.8e-139 499.6 317 71.0
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.3e-139 499.2 317 72.6
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.0e-139 498.8 319 72.4
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 3.0e-139 498.8 317 72.6
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.2e-139 498.0 318 72.3
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 6.8e-139 497.7 318 72.0
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 8.8e-139 497.3 320 72.2
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.5e-138 496.5 318 69.5
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 2.0e-138 496.1 317 71.9
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 5.7e-138 494.6 318 70.4
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.5e-138 494.2 294 74.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 9.7e-138 493.8 315 70.8
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 9.7e-138 493.8 318 71.1
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.2e-137 492.7 318 71.7
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 2.8e-137 492.3 318 70.8
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 3.7e-137 491.9 318 70.8
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 6.3e-137 491.1 318 70.8
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.1e-136 488.8 318 69.8
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 7.0e-136 487.6 305 70.5
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 9.1e-136 487.3 318 67.9
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.6e-135 486.5 320 70.6
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.6e-135 486.5 318 69.2
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 2.7e-135 485.7 318 67.6
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 3.5e-135 485.3 318 70.4
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.5e-135 485.3 318 70.4
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 4.5e-135 485.0 306 71.2
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.9e-135 484.6 311 70.1
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.7e-135 484.2 319 70.5
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.3e-134 483.4 319 68.7
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.2e-134 482.6 318 69.8
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 2.2e-134 482.6 317 70.0
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.9e-134 482.3 318 70.1
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 2.9e-134 482.3 318 69.5
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 3.8e-134 481.9 305 71.5
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 8.5e-134 480.7 315 70.8
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.1e-133 480.3 307 69.4
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.5e-133 479.2 304 68.4
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 2.5e-133 479.2 312 67.9
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 3.2e-133 478.8 305 69.8
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 3.2e-133 478.8 309 68.3
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 4.2e-133 478.4 318 68.2
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 4.2e-133 478.4 316 68.4
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 5.5e-133 478.0 317 67.8
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 5.5e-133 478.0 307 70.0
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 5.5e-133 478.0 305 70.8
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 9.4e-133 477.2 318 67.3
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 9.4e-133 477.2 304 68.8
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 9.4e-133 477.2 319 68.0
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 9.4e-133 477.2 317 67.8
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.6e-132 476.5 304 71.4
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-132 476.5 306 69.9
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 2.1e-132 476.1 305 69.8
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 2.7e-132 475.7 319 68.0
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 2.7e-132 475.7 319 67.7
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.7e-132 474.9 316 67.7
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.0e-131 473.8 306 69.3
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 2.3e-131 472.6 311 68.8
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.0e-131 472.2 306 69.3
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.0e-131 471.9 306 69.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 2.0e-130 469.5 307 68.4
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-130 469.5 316 68.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.6e-130 469.2 305 68.5
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 3.4e-130 468.8 306 68.0
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.4e-130 468.8 305 68.9
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.4e-130 468.4 318 67.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 7.5e-130 467.6 305 68.5
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 9.8e-130 467.2 305 67.5
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 9.8e-130 467.2 312 66.7
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.3e-129 466.8 306 68.3
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.7e-129 466.5 306 69.0
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.7e-129 466.5 305 67.5
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 3.7e-129 465.3 305 68.9
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.1e-128 463.8 305 66.9
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.1e-128 462.2 318 65.7
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 9.1e-128 460.7 318 67.3
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.5e-127 458.8 308 68.8
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.5e-127 458.8 318 66.4
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 5.9e-127 458.0 309 64.4
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.9e-126 455.7 288 74.0
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.6e-126 454.5 315 65.7
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 3.3e-125 452.2 304 66.4
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.3e-125 452.2 288 73.3
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.6e-124 449.9 275 73.5
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 6.1e-124 448.0 304 65.5
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.0e-123 447.2 304 64.8
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.0e-123 447.2 304 65.5
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.2e-122 443.7 300 66.3
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.5e-122 443.4 300 66.3
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 9.8e-122 440.7 300 65.7
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 9.8e-122 440.7 300 66.0
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 9.8e-122 440.7 304 65.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.3e-121 440.3 315 66.0
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 4.1e-120 435.3 304 64.5
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 5.4e-120 434.9 304 64.1
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 9.2e-120 434.1 302 64.9
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 3.5e-119 432.2 315 64.8
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.9e-117 426.4 311 63.3
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.0e-115 420.6 310 61.0
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 2.0e-114 416.4 300 63.7
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 4.4e-114 415.2 316 61.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 5.4e-112 408.3 319 61.4
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.7e-110 403.3 307 59.3
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.9e-110 402.1 270 64.4
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.9e-110 402.1 310 59.7
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 4.9e-105 385.2 310 55.8
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.2e-104 382.5 304 59.9
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.9e-102 375.6 318 58.8
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.9e-102 375.6 318 58.8
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.1e-99 367.5 305 55.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 4.1e-96 355.5 216 74.1
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.2e-95 354.0 223 69.5
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.9e-93 346.7 308 55.8
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 4.2e-88 328.9 312 50.0
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.8e-76 288.9 266 54.1
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.2e-71 274.2 304 47.7
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-67 259.6 180 67.8
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.2e-64 249.2 260 49.6
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.1e-47 193.7 126 64.3
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.6e-47 193.0 121 74.4
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-42 177.2 114 71.9
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 9.7e-37 158.3 307 31.6
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 2.2e-36 157.1 304 31.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 3.6e-31 139.8 234 35.0
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.2e-30 136.0 99 63.6
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.9e-25 120.2 329 27.1
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 5.2e-14 82.8 58 67.2
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 2.0e-13 80.9 75 54.7


User provided reference genes

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