Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02016 Erythranthe guttata HOM05D003010 ORTHO05D010439 1.4e-39 166.0 96 100.0
SGA_v2.0_scaffold90G27813 Striga asiatica HOM05D009305 ORTHO05D010439 4.7e-11 71.2 94 47.9
Haze_25626 Corylus avellana HOM05D003010 ORTHO05D010439 4.0e-10 68.2 92 47.8
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 2.0e-09 65.9 93 46.2
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 7.6e-09 63.9 97 42.3
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 3.8e-08 61.6 91 39.6
CDE01G0248 Ceratophyllum demersum HOM05D003010 ORTHO05D003623 1.4e-07 59.7 94 38.3
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 1.9e-07 59.3 87 44.8
Manes.01G086500 Manihot esculenta HOM05D003010 ORTHO05D003623 3.2e-07 58.5 44 56.8
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 3.2e-07 58.5 98 39.8
Migut.O00184 Erythranthe guttata HOM05D003010 ORTHO05D010439 4.2e-07 58.2 95 47.4
Cc06_g08930 Coffea canephora HOM05D018231 ORTHO05D010439 5.4e-07 57.8 85 40.0
Hund14501 Selenicereus undatus HOM05D003010 ORTHO05D003623 5.4e-07 57.8 47 57.4
TAR636G0256 Trochodendron aralioides HOM05D003010 ORTHO05D003623 7.1e-07 57.4 94 39.4
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 9.3e-07 57.0 88 40.9
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 1.2e-06 56.6 83 36.1
Gohir.D08G184800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 1.2e-06 56.6 91 38.5
COL.COLO4_21678 Corchorus olitorius HOM05D003010 ORTHO05D003623 1.6e-06 56.2 91 38.5
Thecc.03G243800 Theobroma cacao HOM05D003010 ORTHO05D003623 1.6e-06 56.2 91 37.4
Migut.A01045 Erythranthe guttata HOM05D003010 ORTHO05D003623 2.1e-06 55.8 72 45.8
Gohir.A08G165900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 2.1e-06 55.8 91 38.5
Gorai.004G194100 Gossypium raimondii HOM05D003010 ORTHO05D003623 2.1e-06 55.8 91 38.5
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 2.1e-06 55.8 93 40.9
Sc07g0009120 Simmondsia chinensis HOM05D003010 ORTHO05D003623 2.1e-06 55.8 47 51.1
AL6G31590 Arabidopsis lyrata HOM05D009305 ORTHO05D010439 2.7e-06 55.5 96 39.6
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 2.7e-06 55.5 90 42.2
Ciclev10010147m.g Citrus clementina HOM05D003010 ORTHO05D010439 2.7e-06 55.5 101 41.6
Cc08_g11590 Coffea canephora HOM05D003010 ORTHO05D003623 2.7e-06 55.5 47 55.3
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.7e-06 55.5 95 40.0
RcHm_v2.0_Chr2g0089271 Rosa chinensis HOM05D009305 ORTHO05D010439 2.7e-06 55.5 97 39.2
GSVIVG01007344001 Vitis vinifera HOM05D003010 ORTHO05D003623 3.5e-06 55.1 94 35.1
BcaC03g18078 Brassica carinata HOM05D003010 ORTHO05D003623 4.6e-06 54.7 43 51.2
A02p41560 Brassica napus HOM05D003010 ORTHO05D003623 4.6e-06 54.7 43 51.2
C02p61500 Brassica napus HOM05D003010 ORTHO05D003623 4.6e-06 54.7 43 51.2
BolC2t12200H Brassica oleracea HOM05D003010 ORTHO05D003623 4.6e-06 54.7 43 51.2
BraA02t09098Z Brassica rapa HOM05D003010 ORTHO05D003623 4.6e-06 54.7 43 51.2
Lsat_1_v5_gn_5_97941 Lactuca sativa HOM05D003010 ORTHO05D003623 4.6e-06 54.7 95 37.9
Lj8C48T14 Lonicera japonica HOM05D003010 ORTHO05D003623 4.6e-06 54.7 87 40.2
TAR629G3508 Trochodendron aralioides HOM05D003010 ORTHO05D003623 4.6e-06 54.7 91 39.6
Actinidia25899 Actinidia chinensis HOM05D003010 ORTHO05D003623 6.0e-06 54.3 40 62.5
Sc18g0000820 Simmondsia chinensis HOM05D003010 ORTHO05D010439 6.0e-06 54.3 93 37.6
A02p05990 Brassica napus HOM05D009305 ORTHO05D010439 7.8e-06 53.9 81 39.5
BraA02t05551Z Brassica rapa HOM05D009305 ORTHO05D010439 7.8e-06 53.9 81 39.5
Manes.02G043601 Manihot esculenta HOM05D003010 ORTHO05D003623 7.8e-06 53.9 44 54.5


User provided reference genes

Program Settings