Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01828 Erythranthe guttata HOM05D006508 ORTHO05D003378 2.3e-63 245.4 120 100.0
Migut.M01356 Erythranthe guttata HOM05D000275 ORTHO05D003378 2.0e-22 109.4 115 44.3
Migut.M01349 Erythranthe guttata HOM05D000275 ORTHO05D003378 5.7e-22 107.8 111 45.9
Gohir.D09G067950 Gossypium hirsutum HOM05D000275 ORTHO05D003378 6.8e-15 84.3 108 39.8
Migut.M01354 Erythranthe guttata HOM05D006508 ORTHO05D003378 4.4e-14 81.6 125 40.8
Migut.M01350 Erythranthe guttata HOM05D000275 ORTHO05D003378 2.8e-13 79.0 95 41.1
Haze_06883 Corylus avellana HOM05D006508 ORTHO05D003378 6.3e-13 77.8 117 34.2
Migut.M01355 Erythranthe guttata HOM05D000275 ORTHO05D003378 1.1e-12 77.0 87 42.5
DCAR_003257 Daucus carota HOM05D006508 ORTHO05D003378 1.8e-12 76.3 102 35.3
Thecc.04G124500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.8e-12 76.3 105 36.2
SalBow8G3386 Salvia bowleyana HOM05D006508 ORTHO05D003378 2.4e-12 75.9 79 41.8
COL.COLO4_26709 Corchorus olitorius HOM05D006508 ORTHO05D003378 3.1e-12 75.5 110 36.4
Haze_06882 Corylus avellana HOM05D006508 ORTHO05D003378 3.1e-12 75.5 117 34.2
COL.COLO4_03647 Corchorus olitorius HOM05D006508 ORTHO05D003378 5.4e-12 74.7 85 40.0
COL.COLO4_26711 Corchorus olitorius HOM05D006508 ORTHO05D003378 5.4e-12 74.7 110 35.5
DCAR_013213 Daucus carota HOM05D006508 ORTHO05D003378 5.4e-12 74.7 106 35.8
Prupe.4G013200 Prunus persica HOM05D000275 ORTHO05D003378 7.0e-12 74.3 87 42.5
Thecc.06G230300 Theobroma cacao HOM05D000275 ORTHO05D003378 9.1e-12 73.9 107 33.6
COL.COLO4_26721 Corchorus olitorius HOM05D006508 ORTHO05D003378 1.2e-11 73.6 110 35.5
Prupe.4G217000 Prunus persica HOM05D000275 ORTHO05D003378 1.2e-11 73.6 87 42.5
Haze_06893 Corylus avellana HOM05D006508 ORTHO05D003378 2.7e-11 72.4 112 34.8
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 2.7e-11 72.4 116 31.0
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 3.5e-11 72.0 116 31.0
Eucgr.D01379 Eucalyptus grandis HOM05D000275 ORTHO05D003378 5.9e-11 71.2 116 36.2
MD10G1328900 Malus domestica HOM05D000275 ORTHO05D003378 1.3e-10 70.1 104 37.5
Thecc.06G230500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.3e-10 70.1 86 36.0
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 2.3e-10 69.3 106 32.1
Migut.M01353 Erythranthe guttata HOM05D006508 ORTHO05D003378 2.9e-10 68.9 113 35.4
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 6.6e-10 67.8 112 32.1
QL04p068109 Quercus lobata HOM05D006508 ORTHO05D003378 6.6e-10 67.8 107 33.6
QL04p068115 Quercus lobata HOM05D006508 ORTHO05D003378 8.6e-10 67.4 107 33.6
Nitab4.5_0001198g0250 Nicotiana tabacum HOM05D006508 ORTHO05D003378 1.5e-09 66.6 109 33.9
Lalb_Chr07g0188481 Lupinus albus HOM05D000275 ORTHO05D003378 1.9e-09 66.2 102 35.3
Oeu024945.1 Olea europaea HOM05D000275 ORTHO05D000181 1.9e-09 66.2 107 35.5
HPP92_019919 Vanilla planifolia HOM05D000275 ORTHO05D003378 1.9e-09 66.2 110 34.5
Thecc.06G230400 Theobroma cacao HOM05D006508 ORTHO05D003378 2.5e-09 65.9 108 31.5
Nitab4.5_0001821g0020 Nicotiana tabacum HOM05D000275 ORTHO05D003378 3.3e-09 65.5 115 29.6
Peaxi162Scf00033g00043 Petunia axillaris HOM05D000275 ORTHO05D003378 3.3e-09 65.5 112 35.7
Nitab4.5_0010416g0010 Nicotiana tabacum HOM05D000275 ORTHO05D003378 7.2e-09 64.3 87 33.3
PGSC0003DMG400045247 Solanum tuberosum HOM05D006508 ORTHO05D003378 7.2e-09 64.3 108 34.3
TWI38G1893 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 2.1e-08 62.8 106 28.3
Cfa000132 Carpinus fangiana HOM05D006508 ORTHO05D003378 2.8e-08 62.4 107 36.4
Sopen06g019870 Solanum pennellii HOM05D010533 ORTHO05D003378 2.8e-08 62.4 88 37.5
Actinidia31722 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.6e-08 62.0 107 31.8
Lalb_Chr07g0188511 Lupinus albus HOM05D000275 ORTHO05D003378 3.6e-08 62.0 103 35.0
Dinv20120 Davidia involucrata HOM05D006508 ORTHO05D003378 4.7e-08 61.6 115 27.8
Nitab4.5_0000143g0550 Nicotiana tabacum HOM05D006508 ORTHO05D003378 4.7e-08 61.6 100 34.0
Dinv20122 Davidia involucrata HOM05D006508 ORTHO05D003378 6.1e-08 61.2 115 27.8
Hma1.2p1_0128F.1_g059960 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 8.0e-08 60.8 118 35.6
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 8.0e-08 60.8 102 32.4
TWI38G0468 Tripterygium wilfordii HOM05D000275 ORTHO05D003378 8.0e-08 60.8 103 32.0
CANSAT56G3402 Cannabis sativa HOM05D006508 ORTHO05D003378 1.0e-07 60.5 88 40.9
Dinv07381 Davidia involucrata HOM05D006508 ORTHO05D003378 1.0e-07 60.5 115 27.8
Phvul.008G087000 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.0e-07 60.5 110 31.8
TPR.G17317 Trifolium pratense HOM05D000275 ORTHO05D000181 1.0e-07 60.5 107 32.7
TWI38G2037 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 1.0e-07 60.5 94 29.8
vmacro22473 Vaccinium macrocarpon HOM05D000275 ORTHO05D000181 1.0e-07 60.5 105 29.5
CSS0044170 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 1.4e-07 60.1 107 34.6
Cfa000104 Carpinus fangiana HOM05D006508 ORTHO05D003378 1.8e-07 59.7 122 30.3
CiPaw.09G100900 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.8e-07 59.7 108 30.6
CiPaw.09G101000 Carya illinoinensis HOM05D000275 ORTHO05D003378 1.8e-07 59.7 118 32.2
Oeu049720.1 Olea europaea HOM05D000275 ORTHO05D003378 2.3e-07 59.3 105 32.4
SalBow4G2860 Salvia bowleyana HOM05D000275 ORTHO05D000181 2.3e-07 59.3 105 37.1
CSS0033505 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 3.0e-07 58.9 104 33.7
Dinv20119 Davidia involucrata HOM05D006508 ORTHO05D003378 3.0e-07 58.9 113 27.4
Medtr3g056640 Medicago truncatula HOM05D006508 ORTHO05D003378 3.0e-07 58.9 107 29.9
Os03g0808500 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D003378 3.0e-07 58.9 117 28.2
Hma1.2p1_0660F.1_g197500 Hydrangea macrophylla HOM05D000275 ORTHO05D003378 5.2e-07 58.2 110 31.8
Nn2g13360 Nelumbo nucifera HOM05D000275 ORTHO05D003378 5.2e-07 58.2 113 31.9
FvH4_7g10020 Fragaria vesca HOM05D000275 ORTHO05D000181 6.8e-07 57.8 103 32.0
CiPaw.09G101100 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.2e-06 57.0 89 31.5
FAN06G4638 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.2e-06 57.0 103 32.0
FAN06G0058 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.5e-06 56.6 103 32.0
Solyc06g059790.4 Solanum lycopersicum HOM05D010533 ORTHO05D003378 1.5e-06 56.6 79 38.0
ATR1128G035 Amborella trichopoda HOM05D000275 ORTHO05D003378 2.6e-06 55.8 113 28.3
MSTRG.4993 Avicennia marina HOM05D000275 ORTHO05D000181 2.6e-06 55.8 102 34.3
Cc02_g26700 Coffea canephora HOM05D000275 ORTHO05D000181 2.6e-06 55.8 118 32.2
FAN25G2169 Fragaria x ananassa HOM05D006508 ORTHO05D003378 2.6e-06 55.8 74 40.5
COL.COLO4_26712 Corchorus olitorius HOM05D006508 ORTHO05D003378 3.4e-06 55.5 76 38.2
Gohir.A07G075700 Gossypium hirsutum HOM05D006508 ORTHO05D003378 3.4e-06 55.5 85 32.9
Gorai.001G085200 Gossypium raimondii HOM05D006508 ORTHO05D003378 3.4e-06 55.5 97 30.9
CiPaw.09G100300 Carya illinoinensis HOM05D006508 ORTHO05D003378 4.4e-06 55.1 87 36.8
TPR.G13489 Trifolium pratense HOM05D006508 ORTHO05D003378 4.4e-06 55.1 107 28.0
Gohir.D07G080166 Gossypium hirsutum HOM05D006508 ORTHO05D003378 7.5e-06 54.3 97 30.9
TPR.G4368 Trifolium pratense HOM05D006508 ORTHO05D003378 9.8e-06 53.9 107 28.0


User provided reference genes

Program Settings