Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 1.0e-210 736.5 375 100.0
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 3.6e-171 605.1 377 82.2
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 2.4e-167 592.4 379 80.7
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 8.5e-165 583.9 377 79.0
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 7.4e-161 570.9 375 77.6
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.2e-144 516.2 379 71.8
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 9.1e-143 510.8 365 72.6
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 2.7e-142 509.2 372 70.7
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.0e-141 507.3 375 69.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 4.2e-140 501.9 366 69.1
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 9.5e-140 500.7 375 69.1
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.6e-139 500.0 379 69.7
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.1e-139 499.6 373 70.5
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.1e-139 499.6 373 70.5
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.0e-138 497.3 365 70.4
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.0e-138 495.7 369 68.3
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 3.0e-138 495.7 378 69.6
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.0e-137 493.0 369 68.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.0e-137 493.0 370 70.0
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 2.6e-137 492.7 374 69.5
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 4.4e-137 491.9 375 68.8
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 5.7e-137 491.5 378 68.0
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 9.8e-137 490.7 364 68.7
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 2.2e-136 489.6 364 68.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 3.7e-136 488.8 374 67.6
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 3.7e-136 488.8 378 68.3
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 3.7e-136 488.8 375 68.8
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 8.3e-136 487.6 374 68.2
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.4e-135 486.1 373 67.3
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 3.1e-135 485.7 364 67.3
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 3.1e-135 485.7 373 67.3
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 5.4e-135 485.0 338 72.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 9.2e-135 484.2 380 69.2
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.2e-134 483.8 374 66.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 1.2e-134 483.8 378 66.7
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.0e-134 483.0 312 75.6
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.0e-134 483.0 369 66.9
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.3e-133 479.6 378 67.2
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 3.9e-133 478.8 374 67.1
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 5.0e-133 478.4 364 69.0
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 8.6e-133 477.6 376 67.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 8.6e-133 477.6 378 66.9
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.1e-132 477.2 380 65.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 1.1e-132 477.2 365 68.5
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 1.9e-132 476.5 378 66.4
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.9e-132 476.5 381 66.7
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 2.5e-132 476.1 372 65.6
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 3.3e-132 475.7 378 66.4
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 9.5e-132 474.2 378 65.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 9.5e-132 474.2 374 65.8
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.2e-131 473.8 341 68.9
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 1.2e-131 473.8 374 65.5
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.4e-130 470.3 314 73.6
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 5.2e-130 468.4 314 73.2
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 6.8e-130 468.0 348 67.8
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.2e-129 467.2 340 69.1
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.2e-129 467.2 361 66.5
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.0e-129 466.5 349 67.9
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 3.4e-129 465.7 349 67.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 3.4e-129 465.7 382 64.7
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 4.4e-129 465.3 351 68.1
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 5.8e-129 464.9 283 78.4
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.3e-128 463.8 349 67.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.2e-128 463.0 380 64.2
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 4.9e-128 461.8 370 64.3
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 8.3e-128 461.1 378 64.3
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.4e-127 460.3 312 72.4
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.4e-127 460.3 376 65.2
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.2e-127 459.1 372 65.1
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 7.0e-127 458.0 372 65.6
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 9.2e-127 457.6 372 65.3
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.3e-125 453.8 388 61.9
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.3e-125 453.8 322 70.2
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.1e-124 450.7 369 64.5
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.3e-124 449.1 373 63.0
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 4.3e-124 448.7 302 74.5
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 4.7e-123 445.3 366 64.5
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 6.2e-123 444.9 390 59.7
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 3.1e-122 442.6 377 61.5
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 4.0e-122 442.2 309 69.9
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.8e-122 441.4 280 76.4
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 8.9e-122 441.0 407 57.7
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.4e-121 439.1 381 63.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 9.8e-121 437.6 377 62.1
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.3e-120 434.5 280 75.7
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 5.4e-119 431.8 372 58.6
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.3e-117 427.2 354 63.3
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.7e-117 426.8 375 60.8
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 1.6e-110 403.7 462 51.1
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.6e-102 375.6 272 68.0
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.5e-100 370.5 377 55.2
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 2.5e-100 369.8 251 72.1
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 2.1e-99 366.7 350 55.1
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.4e-97 359.4 374 51.6
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.4e-97 359.4 374 51.6
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.1e-92 344.4 232 71.6
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 2.8e-91 339.7 276 59.8
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.6e-89 331.6 204 80.4
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 5.6e-84 315.5 252 61.5
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.6e-84 314.7 251 62.2
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.8e-51 206.1 230 50.4
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.8e-43 180.3 182 47.8
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.1e-42 175.3 167 57.5
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 2.2e-40 170.6 171 56.1
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 5.2e-37 159.5 125 65.6
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 2.2e-27 127.5 126 51.6
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 5.4e-26 122.9 143 49.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 3.5e-25 120.2 104 62.5
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 2.5e-23 114.0 116 46.6
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.9e-19 99.8 132 45.5
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.4e-18 97.4 84 59.5
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 2.3e-08 64.3 48 68.8
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 2.3e-08 64.3 48 68.8
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 4.7e-06 56.6 55 52.7


User provided reference genes

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