Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01817 Erythranthe guttata HOM05D007096 ORTHO05D008288 2.5e-37 158.3 80 100.0
SalBow7G4253 Salvia bowleyana HOM05D007096 ORTHO05D008288 2.4e-16 88.6 89 56.2
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 1.2e-12 76.3 97 44.3
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 1.2e-12 76.3 97 45.4
Migut.I00178 Erythranthe guttata HOM05D007096 ORTHO05D008288 2.1e-12 75.5 81 53.1
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 3.0e-11 71.6 93 45.2
Oeu047297.1 Olea europaea HOM05D007096 ORTHO05D008288 3.0e-11 71.6 89 47.2
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 4.0e-11 71.2 86 45.3
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 4.0e-11 71.2 94 42.6
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 8.8e-11 70.1 86 43.0
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 3.3e-10 68.2 50 64.0
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 4.4e-10 67.8 84 46.4
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 4.4e-10 67.8 84 46.4
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 5.7e-10 67.4 97 43.3
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 5.7e-10 67.4 85 43.5
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 7.5e-10 67.0 88 42.0
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 9.7e-10 66.6 83 43.4
DCAR_016556 Daucus carota HOM05D007096 ORTHO05D008288 1.3e-09 66.2 81 48.1
Lalb_Chr13g0303241 Lupinus albus HOM05D007096 ORTHO05D008288 1.3e-09 66.2 61 50.8
Glyma.04G169400 Glycine max HOM05D007096 ORTHO05D008288 2.2e-09 65.5 85 43.5
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 2.8e-09 65.1 96 44.8
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 3.7e-09 64.7 86 41.9
Glyma.05G026700 Glycine max HOM05D007096 ORTHO05D008288 4.8e-09 64.3 69 44.9
Lsat_1_v5_gn_5_19601 Lactuca sativa HOM05D007096 ORTHO05D008288 4.8e-09 64.3 90 44.4
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 8.2e-09 63.5 97 41.2
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.4e-08 62.8 87 44.8
Dinv19962 Davidia involucrata HOM05D007096 ORTHO05D008288 5.3e-08 60.8 50 60.0
Phvul.009G187200 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 9.1e-08 60.1 86 39.5
Glyma.06G194000 Glycine max HOM05D007096 ORTHO05D008288 1.2e-07 59.7 86 43.0
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 1.2e-07 59.7 89 40.4
Lj1g0007220 Lotus japonicus HOM05D007096 ORTHO05D008288 1.6e-07 59.3 86 39.5
Gohir.D12G179900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.0e-07 58.9 87 39.1
Gorai.008G193000 Gossypium raimondii HOM05D007096 ORTHO05D008288 2.0e-07 58.9 87 39.1
Lalb_Chr12g0196861 Lupinus albus HOM05D007096 ORTHO05D008288 2.0e-07 58.9 57 56.1
arahy.Tifrunner.gnm1.ann1.2U9IP4 Arachis hypogaea HOM05D007096 ORTHO05D008288 2.7e-07 58.5 45 55.6
Sed0011431 Sechium edule HOM05D007096 ORTHO05D008288 2.7e-07 58.5 35 74.3
MELO3C017172.2 Cucumis melo HOM05D007096 ORTHO05D008288 5.9e-07 57.4 85 40.0
Gohir.A12G177500 Gossypium hirsutum HOM05D007096 ORTHO05D008288 5.9e-07 57.4 87 37.9
Medtr3g037730 Medicago truncatula HOM05D007096 ORTHO05D008288 7.7e-07 57.0 44 56.8
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.7e-06 55.8 97 37.1
Lsat_1_v5_gn_4_108521 Lactuca sativa HOM05D007096 ORTHO05D008288 2.2e-06 55.5 80 47.5
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 2.2e-06 55.5 92 44.6
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.2e-06 55.5 86 39.5
CsaV3_1G002320 Cucumis sativus L. HOM05D007096 ORTHO05D008288 3.8e-06 54.7 52 59.6
Phvul.003G190100 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 6.5e-06 53.9 84 39.3


User provided reference genes

Program Settings