Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.5e-104 382.9 190 100.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 6.2e-71 271.2 190 71.1
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 2.6e-69 265.8 185 74.6
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 7.6e-69 264.2 182 71.4
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 7.6e-69 264.2 182 71.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 9.9e-69 263.8 186 71.5
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.7e-68 263.1 185 70.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.9e-67 259.6 185 69.7
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 7.1e-67 257.7 190 67.4
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 4.6e-66 255.0 190 67.4
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.3e-65 252.7 184 68.5
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.9e-64 249.6 194 67.5
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 2.5e-64 249.2 173 68.8
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 9.6e-64 247.3 183 68.9
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.1e-62 243.8 184 66.8
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 2.4e-62 242.7 185 66.5
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 4.0e-62 241.9 185 65.4
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.5e-61 240.0 186 64.5
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.8e-61 238.0 184 65.8
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.3e-60 236.9 188 61.2
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 6.4e-60 234.6 187 66.3
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 8.4e-60 234.2 186 67.7
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.1e-59 233.8 182 65.9
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.1e-59 233.8 181 68.5
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 3.2e-59 232.3 189 66.7
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 4.2e-59 231.9 185 65.9
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 4.2e-59 231.9 187 66.3
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 5.4e-59 231.5 189 66.1
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.6e-58 229.9 187 67.4
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.1e-58 229.6 182 65.9
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.7e-58 229.2 130 83.1
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 2.7e-58 229.2 182 67.6
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 3.5e-58 228.8 185 64.3
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 4.6e-58 228.4 190 63.7
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 7.8e-58 227.6 151 70.9
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.3e-57 226.9 182 64.3
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 1.3e-57 226.9 185 63.8
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 1.3e-57 226.9 182 67.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.7e-57 226.5 185 63.8
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 6.6e-57 224.6 161 70.2
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 6.6e-57 224.6 184 65.8
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.1e-56 223.8 182 62.6
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.1e-56 223.8 184 65.8
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.5e-56 223.4 188 61.2
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.9e-56 223.0 156 71.8
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 3.3e-56 222.2 132 79.5
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 3.3e-56 222.2 194 63.9
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 3.3e-56 222.2 194 63.9
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.3e-56 221.9 194 63.9
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 4.3e-56 221.9 184 65.2
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 5.6e-56 221.5 194 63.9
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.6e-55 218.8 123 81.3
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.1e-54 215.7 186 62.9
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.1e-54 215.7 186 60.8
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 3.1e-54 215.7 182 63.7
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.6e-53 212.6 183 61.2
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 4.4e-53 211.8 185 61.6
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 9.9e-53 210.7 185 61.6
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 8.4e-52 207.6 182 59.3
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 4.2e-51 205.3 112 82.1
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.1e-50 203.0 186 55.4
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.3e-49 200.3 198 57.6
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.3e-49 200.3 190 59.5
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.7e-49 199.9 167 61.1
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 1.7e-49 199.9 185 58.4
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.7e-49 199.9 186 58.1
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.7e-49 199.9 190 56.8
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 3.0e-49 199.1 126 73.0
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.0e-49 199.1 126 73.0
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 3.9e-49 198.7 183 58.5
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 5.1e-49 198.4 185 59.5
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.1e-48 197.2 194 55.7
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.5e-48 196.8 185 58.9
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 2.5e-48 196.1 189 56.1
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.5e-48 196.1 188 58.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 3.3e-48 195.7 120 76.7
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.3e-48 195.7 172 58.7
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 7.3e-48 194.5 186 55.4
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 7.3e-48 194.5 186 55.4
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 7.3e-48 194.5 187 58.3
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 9.6e-48 194.1 183 58.5
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.3e-47 193.7 187 57.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-47 193.4 183 56.3
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.6e-47 193.4 185 58.4
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.1e-47 193.0 186 57.0
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.1e-47 193.0 186 57.0
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 2.8e-47 192.6 182 58.2
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 3.6e-47 192.2 183 57.9
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 3.6e-47 192.2 183 57.9
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 6.2e-47 191.4 184 55.4
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 2.4e-46 189.5 184 56.0
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 5.3e-46 188.3 190 54.2
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 6.9e-46 188.0 184 56.0
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.2e-45 187.2 186 56.5
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.2e-45 187.2 186 56.5
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 2.0e-45 186.4 186 57.5
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.7e-44 183.3 117 70.1
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.2e-43 179.1 149 59.7
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 2.7e-42 176.0 146 60.3
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 8.7e-41 171.0 140 62.1
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 2.6e-37 159.5 185 53.5
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 3.3e-32 142.5 159 50.3
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-31 139.8 85 70.6
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 3.0e-25 119.4 103 55.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.1e-24 117.5 178 45.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 3.7e-23 112.5 110 48.2
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 9.0e-22 107.8 125 50.4
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 2.0e-21 106.7 139 44.6
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 1.1e-19 100.9 139 41.0
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 5.3e-14 82.0 113 45.1
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 8.5e-12 74.7 101 42.6
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 7.2e-11 71.6 66 62.1
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 6.7e-09 65.1 185 32.4


User provided reference genes

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