Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.2e-241 838.6 427 100.0
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 6.1e-151 538.1 456 66.2
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.5e-136 490.3 350 71.4
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.0e-133 479.9 465 57.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.7e-133 478.4 447 58.8
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.3e-132 474.6 408 62.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.6e-130 470.3 380 63.7
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 2.9e-129 466.1 402 60.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-128 464.2 384 64.1
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.5e-128 463.0 377 66.0
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.2e-127 460.7 405 60.2
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-127 460.3 372 63.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.2e-125 454.1 372 64.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.5e-125 453.8 353 65.2
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.0e-125 453.4 359 64.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.4e-125 452.6 372 62.1
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-123 447.6 374 63.4
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-123 447.2 348 62.6
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-123 446.8 395 56.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.4e-123 446.4 349 63.9
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.1e-123 445.7 378 60.3
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 7.0e-123 444.9 356 60.7
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.5e-122 442.6 350 63.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 3.8e-121 439.1 352 61.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.8e-121 439.1 353 60.9
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 5.0e-121 438.7 359 63.5
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.6e-121 438.3 360 61.9
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 8.6e-121 438.0 348 62.9
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 8.6e-121 438.0 369 60.4
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-120 436.4 349 60.7
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-120 436.4 300 69.7
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 4.3e-120 435.6 352 59.9
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 5.6e-120 435.3 409 57.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 5.6e-120 435.3 356 60.1
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.1e-119 433.3 349 59.9
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-119 432.6 349 59.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.7e-119 432.2 383 58.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 6.1e-119 431.8 320 65.0
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.1e-118 429.5 357 59.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 4.0e-118 429.1 332 66.6
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 5.2e-118 428.7 356 58.7
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.5e-117 427.2 414 55.6
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.5e-117 427.2 393 56.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-117 426.8 349 59.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.3e-116 424.1 388 53.9
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.9e-116 422.2 372 59.1
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 4.9e-116 422.2 354 61.0
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 8.3e-116 421.4 302 65.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.1e-115 421.0 517 47.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.4e-115 420.6 361 59.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.4e-115 419.9 355 58.3
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-115 419.9 353 61.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 3.2e-115 419.5 360 56.7
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 5.4e-115 418.7 379 58.3
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 3.5e-114 416.0 301 64.5
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.5e-114 416.0 340 60.0
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 6.0e-114 415.2 348 60.6
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-113 414.5 333 60.1
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-113 413.7 340 59.7
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.3e-113 413.3 359 57.4
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.9e-113 412.5 364 57.1
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.5e-112 410.6 364 57.7
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.5e-112 409.8 322 62.4
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.5e-112 409.8 360 56.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.3e-112 408.3 374 56.4
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.6e-111 407.1 348 58.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.8e-111 406.4 360 56.4
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 6.2e-111 405.2 412 51.0
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.1e-110 404.4 302 64.6
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.8e-110 403.7 364 55.2
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 3.1e-110 402.9 359 55.2
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 5.2e-110 402.1 344 57.8
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.5e-109 400.6 314 62.1
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.5e-109 400.6 350 57.7
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.6e-109 399.8 312 63.1
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 2.6e-109 399.8 338 59.5
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.4e-109 399.1 330 63.0
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.3e-108 397.5 313 61.7
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.7e-108 397.1 306 63.4
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 3.7e-108 396.0 287 63.8
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.9e-108 395.6 346 58.4
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.3e-108 394.8 370 55.4
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.4e-107 392.1 355 56.9
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.0e-106 388.7 350 55.4
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.0e-105 387.9 358 56.4
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.9e-104 383.6 367 53.1
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.6e-104 382.1 328 57.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 4.4e-101 372.5 295 59.7
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.3e-100 370.9 318 59.1
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-96 357.8 376 49.7
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.2e-95 354.4 255 67.5
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.9e-92 343.2 247 66.8
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.4e-92 341.7 247 67.2
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.6e-90 337.4 337 50.7
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.0e-86 322.8 248 61.7
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-81 307.0 367 46.3
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-78 298.1 235 63.4
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.0e-78 295.0 306 54.2
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.4e-67 261.2 256 53.9
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.9e-67 260.8 274 50.7
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.6e-66 257.7 373 41.6
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.9e-65 253.1 292 44.5
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 2.4e-62 243.8 210 60.0
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.2e-60 237.3 231 52.4
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.8e-60 236.5 289 45.7
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.2e-58 231.5 226 53.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-51 206.5 154 60.4
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.6e-50 204.5 287 40.8
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.7e-50 203.8 249 43.8
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.7e-50 203.8 192 49.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.8e-49 201.1 168 57.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.7e-44 184.5 183 54.6
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.6e-42 177.9 192 52.1
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.3e-41 174.1 200 47.0
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.5e-35 152.9 186 46.8
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 3.9e-33 146.7 147 51.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.5e-32 144.8 168 50.6
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 2.4e-30 137.5 109 57.8
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.9e-27 127.9 90 64.4
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 3.2e-27 127.1 86 70.9
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.0e-25 122.1 313 30.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 8.3e-23 112.5 231 35.5
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 3.1e-22 110.5 77 67.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 4.1e-22 110.2 196 39.3
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.0e-21 107.8 194 40.7
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 4.5e-21 106.7 107 53.3
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 5.9e-21 106.3 206 34.5
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.9e-19 101.3 101 56.4
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.5e-19 100.9 105 52.4
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.2e-19 100.5 101 48.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 4.7e-18 96.7 107 47.7
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.7e-18 96.7 151 41.7
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.4e-17 95.1 167 32.9
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.3e-17 94.4 60 73.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 6.8e-17 92.8 66 59.1
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.6e-13 81.6 245 27.3
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 2.0e-13 81.3 58 67.2
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.0e-12 79.0 316 24.1
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.2e-10 72.0 70 55.7
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 4.0e-09 67.0 331 23.3
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 7.5e-08 62.8 250 28.0
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 3.2e-06 57.4 265 23.4
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.4e-06 56.6 62 45.2


User provided reference genes

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