Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01527 Erythranthe guttata HOM05D013849 ORTHO05D045280 4.2e-53 211.1 105 100.0
Migut.H00157 Erythranthe guttata HOM05D013849 ORTHO05D003986 3.2e-13 78.6 52 78.8
Migut.G00908 Erythranthe guttata HOM05D013849 ORTHO05D003986 1.0e-11 73.6 52 75.0
Migut.L00948 Erythranthe guttata HOM05D013849 ORTHO05D003986 1.4e-11 73.2 58 72.4
Migut.K01243 Erythranthe guttata HOM05D013849 ORTHO05D003986 3.0e-11 72.0 52 73.1
Migut.H02275 Erythranthe guttata HOM05D000258 ORTHO05D000153 7.5e-10 67.4 51 66.7
Migut.A01069 Erythranthe guttata HOM05D000258 ORTHO05D045280 1.7e-09 66.2 33 84.8
Solyc11g010990.3 Solanum lycopersicum HOM05D000258 ORTHO05D000153 1.8e-08 62.8 33 78.8
PGSC0003DMG400016114 Solanum tuberosum HOM05D000258 ORTHO05D000153 1.8e-08 62.8 40 70.0
Sopen11g005750 Solanum pennellii HOM05D000258 ORTHO05D000153 3.1e-08 62.0 33 78.8
Nitab4.5_0000402g0200 Nicotiana tabacum HOM05D000258 ORTHO05D000153 4.1e-08 61.6 33 78.8
Rhsim10G0174900 Rhododendron simsii HOM05D000258 ORTHO05D000153 4.1e-08 61.6 33 81.8
Nitab4.5_0000402g0150 Nicotiana tabacum HOM05D000258 ORTHO05D000153 5.4e-08 61.2 33 78.8
Lj4A267T38 Lonicera japonica HOM05D000258 ORTHO05D000153 7.0e-08 60.8 51 60.8
Lju188A12T59 Lonicera japonica HOM05D000258 ORTHO05D000153 7.0e-08 60.8 51 60.8
Solyc11g010980.2 Solanum lycopersicum HOM05D000258 ORTHO05D000153 9.2e-08 60.5 33 75.8
Cc07_g13720 Coffea canephora HOM05D000258 ORTHO05D000153 1.2e-07 60.1 33 78.8
Nitab4.5_0000402g0160 Nicotiana tabacum HOM05D000258 ORTHO05D000153 1.2e-07 60.1 33 75.8
Peaxi162Scf00913g00032 Petunia axillaris HOM05D000258 ORTHO05D000153 1.6e-07 59.7 33 75.8
TPR.G28820 Trifolium pratense HOM05D000258 ORTHO05D000153 1.6e-07 59.7 51 58.8
unitig_37.g12556 Utricularia gibba HOM05D000258 ORTHO05D000153 1.6e-07 59.7 51 58.8
CAN.G1829.7 Capsicum annuum HOM05D000258 ORTHO05D000153 2.0e-07 59.3 33 69.7
Hma1.2p1_0080F.1_g041970 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 2.0e-07 59.3 33 78.8
Nitab4.5_0000402g0240 Nicotiana tabacum HOM05D000258 ORTHO05D000153 2.0e-07 59.3 45 62.2
PGSC0003DMG401016112 Solanum tuberosum HOM05D000258 ORTHO05D000153 2.0e-07 59.3 29 82.8
CAN.G1829.9 Capsicum annuum HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 75.8
Peaxi162Scf00913g00019 Petunia axillaris HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 75.8
Solyc11g011340.2 Solanum lycopersicum HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 75.8
Sopen11g006100 Solanum pennellii HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 75.8
PGSC0003DMG400015678 Solanum tuberosum HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 75.8
SGA_v2.0_scaffold108G30939 Striga asiatica HOM05D000258 ORTHO05D000153 2.7e-07 58.9 33 78.8
CAN.G1829.6 Capsicum annuum HOM05D000258 ORTHO05D000153 3.5e-07 58.5 33 72.7
DCAR_011658 Daucus carota HOM05D000258 ORTHO05D000153 3.5e-07 58.5 33 75.8
Lju188C9G8 Lonicera japonica HOM05D000258 ORTHO05D000153 3.5e-07 58.5 51 58.8
Peaxi162Scf00178g00161 Petunia axillaris HOM05D000258 ORTHO05D000153 3.5e-07 58.5 33 75.8
Peaxi162Scf00178g01410 Petunia axillaris HOM05D000258 ORTHO05D000153 3.5e-07 58.5 33 75.8
Prupe.6G206900 Prunus persica HOM05D000258 ORTHO05D000153 3.5e-07 58.5 40 65.0
Oeu013871.1 Olea europaea HOM05D000258 ORTHO05D000153 5.9e-07 57.8 33 72.7
Peaxi162Scf00821g00047 Petunia axillaris HOM05D000258 ORTHO05D000153 5.9e-07 57.8 33 72.7
Peaxi162Scf00913g00322 Petunia axillaris HOM05D000258 ORTHO05D000153 5.9e-07 57.8 33 72.7
vmacro13030 Vaccinium macrocarpon HOM05D000258 ORTHO05D000153 5.9e-07 57.8 32 78.1
Cc07_g13670 Coffea canephora HOM05D000258 ORTHO05D000153 7.7e-07 57.4 51 58.8
CSS0036955 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 1.0e-06 57.0 51 56.9
CAN.G1829.5 Capsicum annuum HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 69.7
Lj2C521T7 Lonicera japonica HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
Lj2C523T7 Lonicera japonica HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
Peaxi162Scf00498g00219 Petunia axillaris HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
Peaxi162Scf00498g10029 Petunia axillaris HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
SGA_v2.0_scaffold108G30942 Striga asiatica HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
vmacro13029 Vaccinium macrocarpon HOM05D000258 ORTHO05D000153 1.0e-06 57.0 33 75.8
MSTRG.3722 Avicennia marina HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 72.7
Ciclev10025933m.g Citrus clementina HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 72.7
COL.COLO4_11710 Corchorus olitorius HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 75.8
MD01G1043100 Malus domestica HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 75.8
RcHm_v2.0_Chr2g0110451 Rosa chinensis HOM05D000258 ORTHO05D000153 1.3e-06 56.6 32 78.1
Solyc11g010960.2 Solanum lycopersicum HOM05D000258 ORTHO05D000153 1.3e-06 56.6 51 58.8
Sopen11g005730 Solanum pennellii HOM05D000258 ORTHO05D000153 1.3e-06 56.6 51 58.8
PGSC0003DMG402016112 Solanum tuberosum HOM05D000258 ORTHO05D000153 1.3e-06 56.6 51 58.8
TAR628G1488 Trochodendron aralioides HOM05D000258 ORTHO05D000153 1.3e-06 56.6 51 58.8
unitig_0.g1712 Utricularia gibba HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 75.8
unitig_748.g7033 Utricularia gibba HOM05D000258 ORTHO05D000153 1.3e-06 56.6 33 75.8
Cc07_g17530 Coffea canephora HOM05D000258 ORTHO05D000153 1.7e-06 56.2 51 58.8
DCAR_011474 Daucus carota HOM05D000258 ORTHO05D000153 1.7e-06 56.2 51 58.8
Dinv15090 Davidia involucrata HOM05D000258 ORTHO05D000153 1.7e-06 56.2 33 72.7
Dinv27013 Davidia involucrata HOM05D000258 ORTHO05D000153 1.7e-06 56.2 51 56.9
HanXRQChr07g0188901 Helianthus annuus HOM05D000258 ORTHO05D000153 1.7e-06 56.2 33 69.7
Nitab4.5_0000402g0170 Nicotiana tabacum HOM05D000258 ORTHO05D000153 1.7e-06 56.2 33 69.7
Peaxi162Scf00983g00418 Petunia axillaris HOM05D000258 ORTHO05D000153 1.7e-06 56.2 33 72.7
vmacro13027 Vaccinium macrocarpon HOM05D000258 ORTHO05D000153 1.7e-06 56.2 29 79.3
Aqoxy2G03241 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 72.7
Aqoxy6G00667 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 75.8
Hma1.2p1_0675F.1_g201870 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 72.7
QL06p036478 Quercus lobata HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 72.7
Rhsim05G0096900 Rhododendron simsii HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 72.7
Rhsim06G0212600 Rhododendron simsii HOM05D000258 ORTHO05D000153 2.3e-06 55.8 33 72.7
Rhsim10G0174500 Rhododendron simsii HOM05D000258 ORTHO05D000153 2.3e-06 55.8 51 58.8
RcHm_v2.0_Chr2g0110471 Rosa chinensis HOM05D000258 ORTHO05D000153 2.3e-06 55.8 28 85.7
Sabra16G0193000 Salix brachista HOM05D000258 ORTHO05D000153 2.3e-06 55.8 51 56.9
SGA_v2.0_scaffold108G30943 Striga asiatica HOM05D000258 ORTHO05D000153 2.3e-06 55.8 51 56.9
Lj1A824G62 Lonicera japonica HOM05D000258 ORTHO05D000153 2.9e-06 55.5 28 78.6
QL06p036490 Quercus lobata HOM05D000258 ORTHO05D000153 2.9e-06 55.5 33 72.7
VMungo1215G1706 Vigna mungo HOM05D000258 ORTHO05D000153 2.9e-06 55.5 46 54.3
Aqoxy6G00665 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 3.8e-06 55.1 33 72.7
ClCG02G000760 Citrullus lanatus HOM05D000258 ORTHO05D000153 3.8e-06 55.1 51 54.9
Hma1.2p1_0675F.1_g201830 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 3.8e-06 55.1 51 56.9
Lj2A578G12 Lonicera japonica HOM05D000258 ORTHO05D000153 3.8e-06 55.1 51 58.8
Medtr5g031190 Medicago truncatula HOM05D000258 ORTHO05D000153 3.8e-06 55.1 33 72.7
Potri.001G307200 Populus trichocarpa HOM05D000258 ORTHO05D000153 3.8e-06 55.1 51 56.9
Rhsim10G0174300 Rhododendron simsii HOM05D000258 ORTHO05D000153 3.8e-06 55.1 51 56.9
Hund14073 Selenicereus undatus HOM05D000258 ORTHO05D000153 3.8e-06 55.1 33 69.7
Cpa.g.c47796 Carica papaya HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
AUR62018005 Chenopodium quinoa HOM05D000258 ORTHO05D000153 5.0e-06 54.7 40 65.0
DCAR_019615 Daucus carota HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 69.7
ECA234G0621 Erigeron canadensis HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
Migut.K00889 Erythranthe guttata HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 69.7
HanXRQChr17g0562401 Helianthus annuus HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
Prupe.6G162000 Prunus persica HOM05D000258 ORTHO05D000153 5.0e-06 54.7 51 54.9
Prupe.6G205700 Prunus persica HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
Prupe.6G208200 Prunus persica HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
SalBow5G2372 Salvia bowleyana HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 69.7
Sed0013918 Sechium edule HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
SGA_v2.0_scaffold195G40875 Striga asiatica HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
TWI77G0953 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 5.0e-06 54.7 33 72.7
TAR628G1356 Trochodendron aralioides HOM05D000258 ORTHO05D000153 5.0e-06 54.7 51 54.9
Actinidia06503 Actinidia chinensis HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
Aa31LG6G15950 Aethionema arabicum HOM05D000258 ORTHO05D000153 6.6e-06 54.3 51 56.9
arahy.Tifrunner.gnm1.ann1.0QE1FA Arachis hypogaea HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
arahy.Tifrunner.gnm1.ann1.CUBR2G Arachis hypogaea HOM05D000258 ORTHO05D000153 6.6e-06 54.3 28 82.1
arahy.Tifrunner.gnm1.ann1.RKT5P3 Arachis hypogaea HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
arahy.Tifrunner.gnm1.ann1.UMJV5L Arachis hypogaea HOM05D000258 ORTHO05D000153 6.6e-06 54.3 28 82.1
CiPaw.08G143800 Carya illinoinensis HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
Medtr5g031210 Medicago truncatula HOM05D000258 ORTHO05D000153 6.6e-06 54.3 51 56.9
Medtr5g031250 Medicago truncatula HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
Potri.016G078300 Populus trichocarpa HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
PGR031G3959 Punica granatum HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 72.7
QL06p036440 Quercus lobata HOM05D000258 ORTHO05D000153 6.6e-06 54.3 33 69.7
Rhsim10G0174200 Rhododendron simsii HOM05D000258 ORTHO05D000153 6.6e-06 54.3 51 56.9
Sopen11g005740 Solanum pennellii HOM05D000258 ORTHO05D000153 6.6e-06 54.3 26 84.6
SGA_v2.0_scaffold73G24387 Striga asiatica HOM05D000258 ORTHO05D000153 6.6e-06 54.3 51 56.9
Actinidia28817 Actinidia chinensis HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 69.7
Carub.0007s0123 Capsella rubella HOM05D000258 ORTHO05D000153 8.6e-06 53.9 51 58.8
CiPaw.03G130200 Carya illinoinensis HOM05D000258 ORTHO05D000153 8.6e-06 53.9 51 56.9
CDE02G0568 Ceratophyllum demersum HOM05D000258 ORTHO05D000153 8.6e-06 53.9 46 58.7
COL.COLO4_11707 Corchorus olitorius HOM05D000258 ORTHO05D000153 8.6e-06 53.9 28 82.1
Haze_20594 Corylus avellana HOM05D000258 ORTHO05D000153 8.6e-06 53.9 51 56.9
Duzib147G0582 Durio zibethinus HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 69.7
Hma1.2p1_0964F.1_g241990 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 8.6e-06 53.9 26 88.5
Lj2A525T38 Lonicera japonica HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 69.7
Lalb_Chr07g0184631 Lupinus albus HOM05D000258 ORTHO05D000153 8.6e-06 53.9 53 56.6
RcHm_v2.0_Chr6g0270311 Rosa chinensis HOM05D000258 ORTHO05D000153 8.6e-06 53.9 30 73.3
Sc16g0000690 Simmondsia chinensis HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 72.7
Sc16g0001050 Simmondsia chinensis HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 72.7
vmacro13026 Vaccinium macrocarpon HOM05D000258 ORTHO05D000153 8.6e-06 53.9 46 60.9
GSVIVG01006303001 Vitis vinifera HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 72.7
GSVIVG01006462001 Vitis vinifera HOM05D000258 ORTHO05D000153 8.6e-06 53.9 33 72.7
GSVIVG01013448001 Vitis vinifera HOM05D000258 ORTHO05D000153 8.6e-06 53.9 47 57.4


User provided reference genes

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