Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 1.2e-17 92.0 45 100.0
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.2e-17 92.0 45 100.0
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 1.2e-17 92.0 45 100.0
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.2e-17 92.0 45 100.0
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 1.2e-17 92.0 45 100.0
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 1.6e-17 91.7 44 100.0
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 6.0e-17 89.7 45 97.8
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 6.0e-17 89.7 45 97.8
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 6.0e-17 89.7 43 100.0
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 1.3e-16 88.6 45 95.6
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.3e-16 88.6 45 95.6
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 1.3e-16 88.6 45 95.6
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 1.3e-16 88.6 45 95.6
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.3e-16 88.6 45 95.6
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 1.8e-16 88.2 44 95.5
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.8e-16 88.2 44 95.5
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 3.9e-16 87.0 42 97.6
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 3.9e-16 87.0 43 93.0
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 8.7e-16 85.9 45 91.1
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 1.9e-15 84.7 42 95.2
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 95.2
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 3.3e-15 84.0 45 91.1
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 5.7e-15 83.2 42 92.9
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-15 82.8 45 88.9
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-15 82.8 45 88.9
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 7.4e-15 82.8 43 88.4
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 92.9
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 2.8e-14 80.9 42 92.9
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 1.1e-13 79.0 43 88.4
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 2.0e-12 74.7 41 87.8
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 2.0e-12 74.7 42 88.1
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 3.4e-12 73.9 42 85.7
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 4.5e-12 73.6 42 81.0
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.0e-11 72.4 41 85.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 1.7e-11 71.6 38 86.8
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 2.9e-11 70.9 42 81.0
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 9.3e-10 65.9 35 88.6
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 5.1e-08 60.1 31 90.3
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 1.5e-07 58.5 37 78.4
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 3.3e-07 57.4 35 74.3
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 7.4e-07 56.2 28 92.9
arahy.Tifrunner.gnm1.ann1.94BM57 Arachis hypogaea HOM05D011000 ORTHO05D083736 6.3e-06 53.1 30 86.7


User provided reference genes

Program Settings