Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.8e-190 669.1 343 100.0
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 4.2e-78 295.8 511 43.1
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.0e-72 276.9 250 61.6
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.0e-72 276.9 250 61.6
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.0e-72 276.9 250 61.6
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.0e-72 276.9 250 61.6
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.0e-72 276.9 250 61.6
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.8e-68 263.8 312 52.9
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.5e-67 260.8 508 40.6
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 3.4e-67 259.6 308 50.6
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 5.0e-63 245.7 320 46.9
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 1.9e-62 243.8 321 47.7
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 5.5e-62 242.3 306 48.4
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 5.5e-62 242.3 306 48.4
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 1.8e-60 237.3 305 47.5
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-60 236.9 297 49.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 3.0e-60 236.5 305 47.5
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-60 235.3 309 48.2
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-60 235.3 297 49.5
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-60 235.3 309 48.2
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-60 235.3 309 48.2
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.9e-60 235.0 309 48.2
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-59 233.0 308 48.4
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.7e-58 230.7 495 37.4
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 2.2e-58 230.3 320 44.4
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 4.9e-58 229.2 318 43.4
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 4.9e-58 229.2 318 43.4
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 6.3e-58 228.8 471 38.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 5.4e-57 225.7 509 35.8
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.2e-56 224.6 318 44.7
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.2e-56 224.6 320 45.0
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 4.5e-56 222.6 310 45.8
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-56 222.2 308 47.4
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.3e-55 221.1 309 45.3
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 2.9e-55 219.9 494 36.8
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 5.0e-55 219.2 511 35.6
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 8.6e-55 218.4 303 45.9
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 6.8e-52 208.8 319 42.9
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 2.6e-51 206.8 172 64.5
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.9e-50 202.6 161 66.5
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 6.4e-50 202.2 319 41.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 6.4e-50 202.2 319 41.4
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 3.2e-49 199.9 319 41.1
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 3.2e-49 199.9 299 40.8
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 3.2e-49 199.9 304 44.7
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 7.0e-49 198.7 156 67.3
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 5.0e-47 192.6 156 65.4
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 5.0e-47 192.6 289 45.0
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.6e-47 192.2 309 43.4
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.0e-45 185.3 274 44.9
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.4e-44 184.5 230 51.3
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.3e-42 177.9 365 38.4
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 4.1e-41 172.9 511 32.3
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 7.1e-41 172.2 141 64.5
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 6.0e-40 169.1 383 37.3
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 7.8e-40 168.7 292 41.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.0e-39 166.8 220 49.1
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 3.0e-39 166.8 310 37.4
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.9e-39 166.4 231 47.6
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 1.1e-38 164.9 174 51.7
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 1.1e-38 164.9 174 51.7
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 1.1e-38 164.9 174 51.7
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 1.1e-38 164.9 174 51.7
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 1.1e-38 164.9 174 51.7
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 9.5e-38 161.8 294 40.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 2.1e-37 160.6 288 36.5
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.0e-35 154.1 238 42.9
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 7.6e-35 152.1 143 54.5
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.9e-34 149.4 150 55.3
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.1e-33 146.4 172 50.0
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 1.2e-32 144.8 121 66.1
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-32 144.4 147 57.1
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-32 144.4 147 57.1
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 4.6e-32 142.9 197 44.7
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 1.1e-30 138.3 107 68.2
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 7.3e-30 135.6 268 39.9
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 3.6e-29 133.3 85 77.6
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 4.7e-29 132.9 356 36.0
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.4e-28 131.3 170 49.4
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-28 129.0 164 47.0
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 2.4e-25 120.6 133 51.9
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 1.2e-24 118.2 87 67.8
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 4.6e-24 116.3 88 65.9
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.8e-24 115.5 492 29.5
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.3e-23 114.8 143 49.0
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 3.3e-22 110.2 194 38.1
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 9.6e-22 108.6 131 45.8
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 1.1e-20 105.1 206 37.9
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 1.2e-19 101.7 74 64.9
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 4.4e-19 99.8 161 38.5
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 9.9e-19 98.6 103 55.3
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.9e-18 96.3 149 45.6
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.4e-17 94.0 173 35.8
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 6.0e-16 89.4 85 56.5
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 7.9e-16 89.0 101 47.5
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 2.3e-15 87.4 83 54.2
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.1e-14 85.1 59 72.9
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.1e-14 85.1 66 65.2
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-13 81.6 73 61.6
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.3e-13 81.6 58 70.7
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 8.1e-13 79.0 98 44.9
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.8e-12 77.8 68 57.4
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 1.5e-11 74.7 56 64.3
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 2.0e-11 74.3 66 59.1
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 1.3e-10 71.6 61 59.0
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.8e-10 70.1 183 29.5
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.8e-10 70.1 46 67.4
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.2e-09 67.0 332 30.4
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 5.4e-09 66.2 51 68.6
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 9.3e-09 65.5 59 55.9
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.1e-08 64.3 83 45.8
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 3.5e-08 63.5 43 62.8
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 7.9e-08 62.4 42 64.3
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 1.9e-06 57.8 56 58.9


User provided reference genes

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