Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 6.3e-162 573.9 269 100.0
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 7.4e-70 268.1 391 45.8
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-65 251.9 236 60.6
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.1e-64 248.4 230 61.7
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 3.2e-49 199.5 135 76.3
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-45 186.4 296 43.6
Lsat_1_v5_gn_4_147721 Lactuca sativa HOM05D000963 ORTHO05D010201 4.5e-43 179.1 107 81.3
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 1.1e-41 174.5 156 62.2
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.2e-38 164.5 127 69.3
Oeu053980.2 Olea europaea HOM05D000963 ORTHO05D010201 4.4e-38 162.5 127 67.7
Lsat_1_v5_gn_6_94260 Lactuca sativa HOM05D000963 ORTHO05D010073 4.5e-35 152.5 188 51.6
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 6.1e-32 142.1 205 45.4
Sed0024925 Sechium edule HOM05D000963 ORTHO05D010201 4.0e-31 139.4 111 66.7
Nitab4.5_0000085g0180 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.2e-30 137.9 132 56.1
arahy.Tifrunner.gnm1.ann1.6MMU9N Arachis hypogaea HOM05D000963 ORTHO05D010201 9.8e-30 134.8 110 65.5
arahy.Tifrunner.gnm1.ann1.A86CS8 Arachis hypogaea HOM05D000963 ORTHO05D010201 9.8e-30 134.8 110 65.5
arahy.Tifrunner.gnm1.ann1.JP0X74 Arachis hypogaea HOM05D000963 ORTHO05D010201 9.8e-30 134.8 110 65.5
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.7e-29 134.0 129 56.6
SHI36393 Sapria himalayana HOM05D000963 ORTHO05D010201 1.4e-28 131.0 154 52.6
VMungo1383G1942 Vigna mungo HOM05D000963 ORTHO05D010073 2.4e-28 130.2 106 63.2
unitig_87.g27918 Utricularia gibba HOM05D000963 ORTHO05D010201 5.9e-27 125.6 126 58.7
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 7.8e-27 125.2 132 53.8
PGSC0003DMG402008784 Solanum tuberosum HOM05D000963 ORTHO05D010201 2.9e-26 123.2 56 100.0
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 5.0e-26 122.5 86 74.4
unitig_87.g28034 Utricularia gibba HOM05D000963 ORTHO05D010201 8.6e-26 121.7 86 74.4
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-25 121.3 86 74.4
QL05p067011 Quercus lobata HOM05D000074 ORTHO05D001262 3.3e-25 119.8 85 72.9
BraSC25t45902Z Brassica rapa HOM05D000963 ORTHO05D010201 1.2e-24 117.9 59 91.5
BraSC138t45526Z Brassica rapa HOM05D000963 ORTHO05D010201 1.6e-24 117.5 86 72.1
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.1e-24 117.1 85 72.9
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.1e-24 117.1 85 72.9
Lsat_1_v5_gn_2_98400 Lactuca sativa HOM05D000963 ORTHO05D010201 2.1e-24 117.1 56 96.4
Lsat_1_v5_gn_4_147701 Lactuca sativa HOM05D000963 ORTHO05D010201 2.1e-24 117.1 56 96.4
Lsat_1_v5_gn_4_147881 Lactuca sativa HOM05D000963 ORTHO05D010201 2.1e-24 117.1 56 96.4
Lsat_1_v5_gn_9_39260 Lactuca sativa HOM05D000963 ORTHO05D010201 2.1e-24 117.1 56 96.4
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.1e-24 117.1 55 96.4
Lsat_1_v5_gn_2_20500 Lactuca sativa HOM05D000963 ORTHO05D010201 2.8e-24 116.7 55 96.4
Lsat_1_v5_gn_0_29380 Lactuca sativa HOM05D000963 ORTHO05D010201 4.7e-24 115.9 86 72.1
QL93p1338_0001 Quercus lobata HOM05D000963 ORTHO05D010201 1.4e-23 114.4 55 94.5
arahy.Tifrunner.gnm1.ann1.41YVYJ Arachis hypogaea HOM05D000963 ORTHO05D010201 2.3e-23 113.6 68 76.5
CDE02G2524 Ceratophyllum demersum HOM05D000963 ORTHO05D010201 3.0e-23 113.2 55 94.5
DCAR_031888 Daucus carota HOM05D000963 ORTHO05D010201 5.2e-23 112.5 55 90.9
Nitab4.5_0002363g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 5.2e-23 112.5 59 86.4
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 5.2e-23 112.5 86 67.4
Nitab4.5_0007400g0050 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.2e-22 111.3 132 49.2
Atru.chr11.485 Acer truncatum HOM05D000003 ORTHO05D010201 3.4e-22 109.8 86 69.8
Lsat_1_v5_gn_6_94280 Lactuca sativa HOM05D000963 ORTHO05D010201 3.4e-22 109.8 59 88.1
FAN28G1706 Fragaria x ananassa HOM05D000963 ORTHO05D010201 4.4e-22 109.4 56 89.3
Lsat_1_v5_gn_3_5060 Lactuca sativa HOM05D000963 ORTHO05D010201 6.4e-21 105.5 57 86.0
Migut.N02360 Erythranthe guttata HOM05D000963 ORTHO05D010201 1.1e-20 104.8 49 93.9
Nitab4.5_0006632g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 3.2e-20 103.2 55 81.8
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.2e-19 101.3 55 81.8
Gorai.008G055700 Gossypium raimondii HOM05D000963 ORTHO05D010201 2.0e-19 100.5 56 83.9
Gohir.D12G052550 Gossypium hirsutum HOM05D000963 ORTHO05D010201 2.7e-19 100.1 56 83.9
Sc16g0004780 Simmondsia chinensis HOM05D000963 ORTHO05D010201 3.5e-19 99.8 58 81.0
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-19 99.8 56 83.9
BraSC143t45649Z Brassica rapa HOM05D000963 ORTHO05D010201 1.0e-18 98.2 94 57.4
GSVIVG01004896001 Vitis vinifera HOM05D000963 ORTHO05D010201 3.9e-18 96.3 52 82.7
Gorai.005G170600 Gossypium raimondii HOM05D000963 ORTHO05D010201 6.6e-18 95.5 56 80.4
Migut.D01396 Erythranthe guttata HOM05D000963 ORTHO05D010073 1.8e-15 87.4 43 93.0
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 3.1e-15 86.7 143 42.0
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 3.4e-14 83.2 38 97.4
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.7e-13 80.9 46 80.4
CSS0038985 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D010201 1.4e-12 77.8 43 83.7
arahy.Tifrunner.gnm1.ann1.WQN88D Arachis hypogaea HOM05D000963 ORTHO05D010201 2.4e-12 77.0 95 50.5
Gorai.001G160400 Gossypium raimondii HOM05D000963 ORTHO05D010201 5.4e-12 75.9 65 61.5
Sed0016068 Sechium edule HOM05D000963 ORTHO05D010201 9.2e-12 75.1 65 66.2
Sed0018152 Sechium edule HOM05D000963 ORTHO05D010201 9.2e-12 75.1 65 66.2
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 3.5e-11 73.2 40 82.5
Nitab4.5_0000924g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 6.0e-11 72.4 37 89.2
SHI26753 Sapria himalayana HOM05D000963 ORTHO05D010201 5.0e-10 69.3 36 88.9
Sc13g0007000 Simmondsia chinensis HOM05D000540 ORTHO05D000681 4.7e-08 62.8 28 96.4
arahy.Tifrunner.gnm1.ann1.XSZ5BB Arachis hypogaea HOM05D000963 ORTHO05D010201 6.2e-08 62.4 36 83.3
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-07 61.6 31 87.1
SHI36540 Sapria himalayana HOM05D000963 ORTHO05D010201 1.8e-07 60.8 28 96.4
Oeu010678.1 Olea europaea HOM05D000216 ORTHO05D001131 5.2e-07 59.3 81 46.9
Rhsim11G0059100 Rhododendron simsii HOM05D000963 ORTHO05D010201 8.9e-07 58.5 52 59.6
arahy.Tifrunner.gnm1.ann1.RWFL12 Arachis hypogaea HOM05D000729 ORTHO05D002596 1.2e-06 58.2 32 75.0
TWI34G0481 Tripterygium wilfordii HOM05D002423 ORTHO05D002632 1.2e-06 58.2 31 77.4
CDE07G1362 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 7.5e-06 55.5 28 89.3


User provided reference genes

Program Settings