Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 1.6e-73 279.3 132 100.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 6.6e-72 273.9 132 97.7
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.1e-71 273.1 133 98.5
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.1e-71 273.1 133 98.5
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-71 272.3 132 97.0
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.9e-71 272.3 131 96.9
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.9e-71 272.3 131 96.9
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 4.3e-71 271.2 132 97.0
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 4.3e-71 271.2 132 97.0
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 4.3e-71 271.2 132 97.0
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 9.6e-71 270.0 131 96.2
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-70 269.2 132 97.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.1e-70 268.9 132 95.5
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 2.1e-70 268.9 132 96.2
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 3.6e-70 268.1 131 95.4
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 4.7e-70 267.7 133 96.2
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 6.2e-70 267.3 132 95.5
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-69 266.2 128 96.9
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 1.4e-69 266.2 133 96.2
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 3.1e-69 265.0 132 93.9
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 4.0e-69 264.6 133 95.5
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.4e-68 261.5 132 93.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-67 259.2 128 94.5
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.8e-67 258.1 131 93.1
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 3.8e-67 258.1 129 93.8
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 3.8e-67 258.1 129 93.8
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.2e-66 255.0 131 93.1
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.9e-64 248.1 132 89.4
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 6.6e-64 247.3 123 95.1
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 8.7e-64 246.9 126 92.9
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.3e-63 245.0 133 91.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.3e-63 244.6 123 91.1
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 4.8e-62 241.1 133 88.0
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 8.1e-62 240.4 130 85.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.8e-61 239.2 118 95.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.8e-61 239.2 118 95.8
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.7e-59 232.6 123 90.2
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 3.8e-59 231.5 132 85.6
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.2e-57 226.5 118 89.8
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.9e-57 223.8 127 84.3
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.3e-56 223.0 106 97.2
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.1e-55 219.9 106 96.2
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.5e-55 219.5 115 91.3
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 3.3e-55 218.4 145 78.6
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.3e-55 218.4 110 93.6
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.1e-53 213.4 110 91.8
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.4e-53 212.2 109 92.7
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-53 212.2 106 93.4
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-52 209.9 108 93.5
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-52 209.9 108 93.5
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-52 209.1 106 90.6
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 3.4e-52 208.4 126 82.5
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-51 206.5 132 78.0
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-51 206.1 106 89.6
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.4e-51 204.1 106 90.6
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-51 203.8 102 95.1
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 1.1e-50 203.4 132 79.5
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 2.4e-50 202.2 97 100.0
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-49 199.9 101 93.1
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.8e-48 196.1 106 87.7
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.0e-48 195.3 118 82.2
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.4e-47 190.7 99 88.9
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.4e-47 190.7 99 88.9
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 2.1e-46 189.1 90 96.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.2e-46 187.2 99 87.9
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.2e-46 187.2 99 87.9
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.2e-46 187.2 99 87.9
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.8e-45 186.0 88 96.6
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-44 182.6 90 94.4
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.8e-44 181.0 90 93.3
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.0e-43 180.3 90 93.3
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 3.8e-43 178.3 132 69.7
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-41 172.6 90 92.2
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.5e-41 171.8 80 97.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 3.5e-41 171.8 95 84.2
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 6.0e-41 171.0 92 92.4
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.0e-40 168.7 107 80.4
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 1.1e-39 166.8 87 88.5
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-39 165.6 81 93.8
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-39 165.6 81 93.8
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-39 165.6 81 93.8
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-39 165.6 81 93.8
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-39 165.6 81 93.8
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 1.3e-38 163.3 77 94.8
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 6.3e-38 161.0 89 82.0
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 9.0e-37 157.1 80 90.0
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.3e-35 153.3 92 87.0
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.7e-35 152.9 80 88.8
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 5.0e-35 151.4 84 88.1
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.2e-34 148.7 81 84.0
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-34 147.9 80 88.8
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 9.3e-34 147.1 67 98.5
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 9.3e-34 147.1 67 98.5
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-33 146.7 76 89.5
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.6e-33 146.4 76 88.2
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.7e-33 145.6 89 78.7
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 5.1e-32 141.4 88 77.3
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 1.1e-31 140.2 125 62.4
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.5e-31 139.0 80 86.2
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.7e-31 137.9 93 77.4
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 9.7e-31 137.1 96 74.0
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-30 136.3 71 88.7
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-29 133.7 66 97.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-29 132.5 73 87.7
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 4.1e-29 131.7 66 95.5
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 6.9e-29 131.0 122 58.2
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-28 129.8 64 96.9
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 2.6e-28 129.0 67 94.0
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 3.4e-28 128.6 73 84.9
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 3.4e-28 128.6 57 98.2
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 4.5e-28 128.3 73 84.9
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-27 126.7 66 92.4
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-27 126.7 66 92.4
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 3.8e-27 125.2 73 83.6
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 8.5e-27 124.0 74 83.8
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 4.7e-25 118.2 119 53.8
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-24 116.3 92 66.3
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 2.3e-24 115.9 69 76.8
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 3.7e-22 108.6 123 53.7
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 6.3e-22 107.8 62 85.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 6.9e-21 104.4 49 91.8
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 3.4e-20 102.1 62 80.6
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.4e-20 102.1 45 95.6
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-19 100.1 46 97.8
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.3e-19 100.1 43 97.7
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 3.8e-19 98.6 58 82.8
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-18 96.3 46 97.8
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 1.9e-18 96.3 46 91.3
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 9.4e-18 94.0 48 93.8
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-17 93.6 47 95.7
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 2.1e-17 92.8 42 95.2
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 2.1e-17 92.8 54 85.2
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 4.7e-17 91.7 44 97.7
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 2.6e-15 85.9 84 58.3
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 4.4e-15 85.1 42 92.9
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 7.4e-15 84.3 61 68.9
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 9.7e-15 84.0 41 95.1
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-13 80.1 41 90.2
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 1.8e-13 79.7 43 90.7
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 5.9e-12 74.7 35 91.4
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.3e-11 73.6 40 85.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.3e-11 73.6 40 85.0
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 2.1e-09 66.2 51 76.5
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 1.8e-08 63.2 46 69.6


User provided reference genes

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