Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01380 Erythranthe guttata HOM05D008354 ORTHO05D010055 4.1e-56 221.1 106 100.0
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 7.3e-21 104.0 69 82.6
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 3.1e-19 98.6 108 53.7
DCAR_031655 Daucus carota HOM05D008354 ORTHO05D010055 3.1e-19 98.6 108 53.7
Gohir.D11G276000 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.1e-19 98.6 74 70.3
PGSC0003DMG401008784 Solanum tuberosum HOM05D008354 ORTHO05D010055 7.5e-18 94.0 71 69.0
Lsat_1_v5_gn_2_20541 Lactuca sativa HOM05D008354 ORTHO05D010055 1.7e-17 92.8 71 69.0
Lsat_1_v5_gn_3_110420 Lactuca sativa HOM05D008354 ORTHO05D010055 1.7e-17 92.8 71 69.0
Lsat_1_v5_gn_4_147820 Lactuca sativa HOM05D008354 ORTHO05D010055 1.7e-17 92.8 71 69.0
Lsat_1_v5_gn_5_181860 Lactuca sativa HOM05D008354 ORTHO05D010055 1.7e-17 92.8 71 69.0
Gohir.A03G019700 Gossypium hirsutum HOM05D008354 ORTHO05D010055 2.9e-17 92.0 74 70.3
arahy.Tifrunner.gnm1.ann1.V91BB6 Arachis hypogaea HOM05D008354 ORTHO05D010055 3.7e-17 91.7 70 70.0
Migut.D01398 Erythranthe guttata HOM05D008354 ORTHO05D010055 6.4e-17 90.9 71 67.6
Potri.013G092500 Populus trichocarpa HOM05D008354 ORTHO05D010055 6.4e-17 90.9 71 67.6
MELO3C028020.2 Cucumis melo HOM05D008354 ORTHO05D010055 1.9e-16 89.4 68 69.1
LjContig00489g0002748 Lotus japonicus HOM05D008354 ORTHO05D010055 1.9e-16 89.4 70 72.9
PGSC0003DMG400029000 Solanum tuberosum HOM05D008354 ORTHO05D010055 3.2e-16 88.6 71 66.2
LjContig00315g0013064 Lotus japonicus HOM05D008354 ORTHO05D010055 5.4e-16 87.8 70 70.0
LjContig00439g0006222 Lotus japonicus HOM05D008354 ORTHO05D010055 5.4e-16 87.8 70 70.0
LjContig00446g0002728 Lotus japonicus HOM05D008354 ORTHO05D010055 5.4e-16 87.8 70 70.0
Aqoxy38s013 Aquilegia oxysepala HOM05D008354 ORTHO05D010055 1.2e-15 86.7 71 64.8
Gohir.D12G080900 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.5e-15 85.1 74 67.6
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 3.5e-15 85.1 67 65.7
Gohir.A07G174583 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-14 82.8 74 63.5
Gohir.D10G128050 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.0e-14 82.0 74 60.8
Gohir.D08G104600 Gossypium hirsutum HOM05D008354 ORTHO05D010055 5.1e-14 81.3 72 65.3
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 4.3e-13 78.2 46 82.6
Gohir.D02G108601 Gossypium hirsutum HOM05D008354 ORTHO05D010055 2.1e-12 75.9 67 62.7
arahy.Tifrunner.gnm1.ann1.XERY24 Arachis hypogaea HOM05D001966 ORTHO05D007227 6.2e-12 74.3 54 68.5
Gohir.A09G101750 Gossypium hirsutum HOM05D008354 ORTHO05D010055 4.0e-11 71.6 60 68.3
Psat7g058040 Pisum sativum HOM05D008354 ORTHO05D010055 5.2e-11 71.2 61 63.9
CAN.G947.16 Capsicum annuum HOM05D001697 ORTHO05D001905 7.6e-10 67.4 54 63.0
Glyma.03G170700 Glycine max HOM05D008354 ORTHO05D010055 3.8e-09 65.1 70 55.7
Gohir.A04G039316 Gossypium hirsutum HOM05D008354 ORTHO05D010055 6.4e-09 64.3 70 54.3
Gohir.A05G323748 Gossypium hirsutum HOM05D008354 ORTHO05D010055 6.4e-09 64.3 70 54.3
MELO3C000043.2 Cucumis melo HOM05D008354 ORTHO05D010055 1.4e-08 63.2 60 58.3
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 1.9e-08 62.8 59 55.9
Medtr5g080915 Medicago truncatula HOM05D008354 ORTHO05D010055 3.2e-08 62.0 40 75.0
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 5.4e-08 61.2 45 66.7
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 7.1e-08 60.8 54 59.3
Nitab4.5_0002404g0010 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.2e-07 60.1 56 57.1
Gohir.A09G103400 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.6e-07 59.7 70 51.4
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.6e-07 59.7 61 57.4
Lsat_1_v5_gn_3_108780 Lactuca sativa HOM05D008354 ORTHO05D010055 3.5e-07 58.5 53 58.5
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 4.6e-07 58.2 62 51.6
Nitab4.5_0004841g0100 Nicotiana tabacum HOM05D008016 ORTHO05D010055 4.6e-07 58.2 45 66.7
Nitab4.5_0004841g0090 Nicotiana tabacum HOM05D008354 ORTHO05D010055 6.0e-07 57.8 54 57.4
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.0e-06 57.0 60 51.7
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.3e-06 56.6 54 53.7
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 1.3e-06 56.6 51 58.8
Gohir.1Z049582 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-06 56.2 34 79.4
Gohir.A04G039501 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-06 56.2 34 79.4
Gohir.D03G075240 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-06 56.2 34 79.4
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.0e-06 55.5 58 48.3
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 3.9e-06 55.1 54 55.6
Gohir.D04G096644 Gossypium hirsutum HOM05D008354 ORTHO05D010055 5.1e-06 54.7 70 47.1


User provided reference genes

Program Settings