Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01355 Erythranthe guttata HOM05D001033 ORTHO05D005438 1.7e-32 142.1 73 100.0
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 8.6e-21 103.2 77 75.3
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 8.6e-21 103.2 81 72.8
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 1.5e-20 102.4 77 75.3
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 1.5e-20 102.4 77 75.3
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 1.5e-20 102.4 77 75.3
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 1.5e-20 102.4 77 75.3
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 1.9e-20 102.1 77 74.0
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 1.9e-20 102.1 77 74.0
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 1.9e-20 102.1 77 74.0
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 1.9e-20 102.1 77 74.0
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 4.2e-20 100.9 77 72.7
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 74.0
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 74.0
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 74.0
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 5.5e-20 100.5 77 72.7
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 7.2e-20 100.1 77 72.7
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 9.5e-20 99.8 77 71.4
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 9.5e-20 99.8 77 71.4
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 9.5e-20 99.8 77 72.7
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 9.5e-20 99.8 77 72.7
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.6e-19 99.0 77 71.4
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.6e-19 99.0 77 71.4
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 1.6e-19 99.0 77 71.4
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.6e-19 99.0 77 72.7
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 1.6e-19 99.0 77 70.1
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 2.1e-19 98.6 77 71.4
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 2.1e-19 98.6 77 70.1
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 2.8e-19 98.2 84 65.5
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 2.8e-19 98.2 77 71.4
Gohir.D07G155048 Gossypium hirsutum HOM05D001033 ORTHO05D005438 4.7e-19 97.4 78 70.5
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 4.7e-19 97.4 76 69.7
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 1.0e-18 96.3 77 70.1
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 1.4e-18 95.9 81 70.4
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 3.4e-17 91.3 73 71.2
PGSC0003DMG400015304 Solanum tuberosum HOM05D001033 ORTHO05D005438 5.4e-15 84.0 66 72.7
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 7.0e-15 83.6 68 70.6
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 9.2e-15 83.2 70 68.6
Gorai.009G280700 Gossypium raimondii HOM05D001033 ORTHO05D005438 2.7e-14 81.6 57 78.9
Oeu015831.1 Olea europaea HOM05D001033 ORTHO05D005438 1.7e-13 79.0 66 71.2
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 2.3e-13 78.6 67 68.7
Gohir.D05G268250 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.5e-12 75.9 57 75.4
Gorai.013G158200 Gossypium raimondii HOM05D001033 ORTHO05D005438 4.3e-12 74.3 69 60.9
Gohir.D12G053450 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.1e-11 72.0 75 58.7
MD11G1295600 Malus domestica HOM05D001033 ORTHO05D005438 6.8e-10 67.0 51 70.6
Lalb_Chr01g0022761 Lupinus albus HOM05D001033 ORTHO05D005438 5.8e-09 63.9 65 61.5
BNapus_Darmor_BZH_scaffold_287p00100 Brassica napus HOM05D001033 ORTHO05D005438 2.2e-08 62.0 35 85.7
Nn4g22664 Nelumbo nucifera HOM05D001033 ORTHO05D005438 6.4e-08 60.5 33 84.8
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 8.3e-08 60.1 52 65.4
BNapus_Darmor_BZH_scaffold_253p00180 Brassica napus HOM05D001033 ORTHO05D005438 8.3e-08 60.1 29 93.1
Gohir.A10G087950 Gossypium hirsutum HOM05D001033 ORTHO05D005438 8.3e-08 60.1 47 72.3
Medtr3g035740 Medicago truncatula HOM05D001033 ORTHO05D005438 8.3e-08 60.1 29 93.1
EL10As15g24122 Beta vulgaris HOM05D001033 ORTHO05D005438 1.1e-07 59.7 37 78.4
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 2.4e-07 58.5 52 65.4
HanXRQChr04g0118141 Helianthus annuus HOM05D001033 ORTHO05D005438 3.2e-07 58.2 49 69.4
C04p22580 Brassica napus HOM05D001033 ORTHO05D005438 1.2e-06 56.2 57 61.4
HanXRQChr02g0054851 Helianthus annuus HOM05D001033 ORTHO05D005438 1.6e-06 55.8 39 74.4
SMO086G0042 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 4.6e-06 54.3 73 47.9
SMO086G0053 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 4.6e-06 54.3 73 47.9


User provided reference genes

Program Settings