Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 2.0e-68 262.3 135 100.0
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 3.0e-64 248.4 135 94.8
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.0e-64 248.4 135 94.8
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.0e-64 248.4 135 94.8
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.3e-62 243.0 135 93.3
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 2.3e-59 232.3 135 88.9
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 3.3e-58 228.4 135 89.6
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 5.6e-58 227.6 135 88.1
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 3.6e-57 224.9 135 86.7
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 1.0e-56 223.4 125 94.4
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 1.0e-56 223.4 135 85.2
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 3.1e-56 221.9 130 89.2
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 3.1e-56 221.9 135 85.9
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.7
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.7
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.7
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.7
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 6.8e-56 220.7 135 83.0
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.9e-56 220.3 135 83.0
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 4.4e-55 218.0 135 82.2
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.4e-55 218.0 135 82.2
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 7.5e-55 217.2 135 82.2
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 4.9e-54 214.5 135 81.5
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 81.5
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.6e-52 209.5 131 83.2
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 3.9e-51 204.9 135 79.3
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 135 78.5
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 6.2e-49 197.6 134 77.6
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-48 196.4 129 82.9
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.9e-48 193.7 118 82.2
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.4e-47 191.8 127 82.7
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.4e-47 191.4 114 83.3
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 7.5e-47 190.7 130 77.7
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 7.5e-47 190.7 130 77.7
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.9e-46 188.0 117 82.9
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 2.4e-45 185.7 118 82.2
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 4.1e-45 184.9 117 82.1
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 5.4e-45 184.5 123 80.5
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 5.4e-45 184.5 135 71.9
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 2.7e-44 182.2 135 73.3
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 4.6e-44 181.4 131 76.3
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 4.6e-44 181.4 118 79.7
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 7.3e-42 174.1 104 82.7
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.7e-41 171.4 115 81.7
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 8.1e-41 170.6 118 75.4
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.8e-40 169.5 118 74.6
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 3.8e-38 161.8 135 62.2
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-37 158.3 91 86.8
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 1.5e-34 149.8 112 71.4
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.6e-33 146.4 85 89.4
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 1.8e-32 142.9 94 79.8
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 4.0e-32 141.7 82 89.0
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 6.9e-32 141.0 97 77.3
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 8.9e-32 140.6 92 81.5
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.3e-30 136.7 135 58.5
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.3e-29 130.6 135 57.0
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 3.5e-28 128.6 87 77.0
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 6.6e-27 124.4 99 64.6
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 1.5e-26 123.2 82 78.0
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.3e-25 120.2 69 88.4
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 2.0e-23 112.8 93 63.4
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.6e-23 112.5 70 80.0
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 5.8e-23 111.3 90 68.9
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 8.4e-22 107.5 81 75.3
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 1.9e-21 106.3 134 47.0
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 7.1e-21 104.4 70 77.1
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 1.0e-19 100.5 70 74.3
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 3.0e-19 99.0 55 92.7
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 3.9e-19 98.6 63 84.1
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.5e-18 96.7 58 81.0
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.3e-17 93.6 58 84.5
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-17 93.2 58 81.0
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-17 93.2 58 81.0
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 5.3e-16 88.2 54 83.3
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 6.9e-16 87.8 58 77.6
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 6.9e-16 87.8 58 79.3
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 6.9e-16 87.8 58 79.3
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 6.9e-16 87.8 58 79.3
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 1.2e-15 87.0 50 92.0
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.3e-14 83.6 58 75.9
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 6.4e-14 81.3 56 73.2
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 8.4e-14 80.9 52 76.9
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 1.4e-13 80.1 58 72.4
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 1.9e-13 79.7 59 71.2
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 7.9e-12 74.3 56 64.3
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 7.9e-12 74.3 56 64.3
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 7.9e-12 74.3 56 64.3
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 7.9e-12 74.3 56 64.3
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 7.9e-12 74.3 56 64.3
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 7.9e-12 74.3 56 64.3
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 7.9e-12 74.3 56 64.3
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.8e-11 73.2 58 72.4
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 2.3e-11 72.8 56 62.5
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-09 67.0 78 51.3
BraSC143t45637Z Brassica rapa HOM05D002824 ORTHO05D007162 1.1e-08 63.9 40 80.0
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.0e-07 59.7 51 64.7
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 1.3e-06 57.0 42 69.0
ClCG10G008280 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.3e-06 57.0 36 80.6
CSS0027777 Camellia sinensis var. sinensis HOM05D002824 ORTHO05D007162 6.5e-06 54.7 83 48.2


User provided reference genes

Program Settings