Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 7.1e-218 760.4 401 100.0
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 8.6e-131 471.1 402 64.2
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 8.1e-105 384.8 389 56.8
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 4.5e-95 352.4 413 51.3
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.7e-94 350.5 420 51.4
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.8e-91 340.5 338 58.3
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 7.4e-90 335.1 421 50.6
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 6.9e-88 328.6 447 45.0
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 8.1e-81 305.1 423 46.3
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 3.1e-80 303.1 403 44.9
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 5.8e-79 298.9 378 47.1
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 4.2e-77 292.7 404 45.3
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.1e-76 290.4 419 45.1
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 6.0e-76 288.9 341 49.6
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 7.9e-76 288.5 399 46.1
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 1.8e-75 287.3 415 43.1
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 1.8e-75 287.3 415 43.1
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 6.7e-75 285.4 335 50.7
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.5e-74 284.3 430 42.6
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 9.6e-74 281.6 422 43.1
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.6e-73 280.8 424 42.9
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 2.8e-73 280.0 410 44.4
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 4.8e-73 279.3 424 42.7
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 4.8e-73 279.3 424 42.2
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 6.3e-73 278.9 424 42.7
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 8.2e-73 278.5 423 42.6
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.4e-72 277.7 399 44.4
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 1.5e-71 274.2 409 44.0
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.2e-70 270.4 376 43.6
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.1e-66 258.1 405 41.0
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.1e-66 258.1 426 41.5
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.9e-62 243.4 413 38.3
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.8e-62 243.0 371 42.3
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 8.5e-62 241.9 417 38.4
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 3.2e-61 240.0 408 38.0
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 3.2e-61 240.0 419 38.7
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 4.2e-61 239.6 438 37.2
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 4.2e-61 239.6 415 38.3
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 4.2e-61 239.6 415 38.3
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 4.2e-61 239.6 415 38.3
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 9.4e-61 238.4 405 40.7
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 2.1e-60 237.3 423 37.6
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 6.1e-60 235.7 416 38.2
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 6.1e-60 235.7 414 38.4
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 2.6e-58 230.3 417 37.4
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 5.7e-58 229.2 416 37.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 7.4e-58 228.8 407 40.0
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.2e-57 227.3 409 39.6
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 1.4e-53 214.5 313 41.2
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 6.1e-52 209.1 417 35.0
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.8e-51 207.6 308 42.5
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 5.2e-51 206.1 317 40.7
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.3e-49 201.4 356 39.0
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 3.7e-49 199.9 378 37.3
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.3e-49 199.1 371 39.1
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 8.2e-49 198.7 197 54.8
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 1.3e-46 191.4 331 38.7
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.1e-44 184.1 253 43.1
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.5e-42 177.9 371 37.2
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 8.0e-36 155.6 370 34.1
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 2.0e-18 97.8 322 29.2
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 4.0e-11 73.6 69 56.5
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 2.7e-07 60.8 191 29.3


User provided reference genes

Program Settings