Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 0.0e+00 1311.6 664 100.0
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 1.3e-240 836.6 666 66.5
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.3e-219 766.9 669 61.9
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.1e-210 737.3 665 59.5
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 1.3e-203 713.8 670 55.5
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 2.8e-203 712.6 667 55.2
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 9.7e-196 687.6 666 56.5
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 5.3e-194 681.8 665 53.7
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 1.2e-193 680.6 665 55.2
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 6.5e-192 674.9 665 53.7
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 3.2e-191 672.5 643 56.1
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 9.4e-191 671.0 663 55.7
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 1.4e-186 657.1 665 54.0
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 2.4e-186 656.4 663 53.4
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 1.0e-184 651.0 657 52.5
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 2.2e-184 649.8 680 52.6
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 1.1e-183 647.5 665 52.8
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 2.5e-183 646.4 668 53.3
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 2.3e-181 639.8 674 52.5
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 3.7e-179 632.5 666 52.6
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 4.8e-179 632.1 666 52.0
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.4e-178 630.6 665 51.0
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 3.5e-177 625.9 666 51.8
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 1.7e-171 607.1 690 48.6
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 8.5e-168 594.7 649 49.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 4.2e-167 592.4 644 49.8
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 1.5e-164 583.9 593 52.3
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 2.0e-164 583.6 667 48.3
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 3.4e-164 582.8 665 48.9
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 7.5e-164 581.6 668 48.4
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 9.8e-164 581.3 668 48.8
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 3.7e-163 579.3 699 47.9
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 1.1e-162 577.8 712 47.6
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.1e-162 577.8 664 48.0
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 1.7e-160 570.5 499 59.5
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 2.9e-160 569.7 663 46.9
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.5e-159 567.4 655 47.6
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 3.2e-159 566.2 672 47.9
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 1.2e-158 564.3 666 47.1
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 1.6e-158 563.9 757 44.3
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 4.7e-158 562.4 666 46.7
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 8.0e-158 561.6 786 43.3
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 1.4e-157 560.8 664 46.8
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.8e-155 553.1 654 47.4
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 4.9e-155 552.4 667 47.2
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 3.1e-154 549.7 669 46.9
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 7.7e-153 545.0 475 59.8
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 7.7e-153 545.0 598 50.0
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 1.7e-152 543.9 673 46.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 3.8e-152 542.7 675 46.4
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 8.6e-152 541.6 668 45.5
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 3.3e-151 539.7 675 46.1
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 5.6e-151 538.9 675 46.5
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 7.3e-151 538.5 675 46.1
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 1.2e-150 537.7 672 45.8
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 3.6e-150 536.2 681 44.9
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 6.1e-150 535.4 674 45.3
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 4.0e-149 532.7 671 46.9
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 1.5e-148 530.8 597 50.3
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 6.4e-147 525.4 518 52.1
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 6.4e-147 525.4 654 47.2
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 8.3e-147 525.0 664 44.9
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 1.1e-146 524.6 673 45.2
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 3.9e-144 516.2 595 47.9
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 6.6e-144 515.4 599 47.9
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 4.9e-139 499.2 583 47.9
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 7.0e-138 495.4 674 42.7
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.3e-136 491.1 439 58.5
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 3.0e-136 490.0 495 52.1
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 5.0e-136 489.2 466 56.0
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 4.0e-133 479.6 673 42.3
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 2.7e-129 466.8 667 42.4
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 3.5e-129 466.5 529 49.0
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 2.8e-126 456.8 703 40.5
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 1.7e-123 447.6 563 43.9
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.2e-121 441.4 716 39.5
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 2.1e-121 440.7 691 40.5
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 8.4e-115 418.7 730 37.0
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 1.0e-112 411.8 694 40.8
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 1.0e-112 411.8 675 40.0
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 5.1e-112 409.5 494 44.7
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 9.9e-108 395.2 597 40.7
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 1.7e-107 394.4 726 37.2
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 1.7e-104 384.4 475 49.3
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 4.2e-98 363.2 687 38.3
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 4.6e-97 359.8 378 52.4
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 1.1e-95 355.1 808 33.3
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 7.1e-90 335.9 697 35.6
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 3.3e-87 327.0 459 40.7
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 2.8e-86 323.9 505 40.6
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 4.8e-86 323.2 505 40.6
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.6e-81 308.1 268 59.7
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 4.6e-81 306.6 712 35.3
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 2.7e-65 254.2 271 52.8
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 2.3e-64 251.1 279 49.1
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 1.1e-61 242.3 531 31.1
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 2.6e-60 237.7 201 67.2
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 8.5e-51 206.1 383 36.0
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 1.8e-37 161.8 196 44.9
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 1.6e-36 158.7 385 31.4
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 2.0e-36 158.3 253 36.0
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 1.1e-34 152.5 384 31.2
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 5.2e-32 143.7 206 43.2
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 9.2e-29 132.9 172 40.7
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 9.2e-29 132.9 174 41.4
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 1.6e-28 132.1 135 52.6
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 8.0e-25 119.8 492 27.0
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 1.7e-19 102.1 177 32.8
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 6.8e-16 90.1 505 22.0
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 2.0e-15 88.6 177 35.6
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.6e-12 79.0 167 31.7
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 3.9e-11 74.3 126 40.5
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 5.1e-11 73.9 84 41.7
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 3.8e-06 57.8 107 34.6
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 4.9e-06 57.4 57 50.9


User provided reference genes

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