Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 6.4e-108 394.0 192 100.0
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.5e-80 302.4 178 80.3
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 2.1e-79 299.3 177 81.4
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 4.8e-79 298.1 177 81.4
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 8.1e-79 297.4 178 80.9
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.1e-78 297.0 177 80.8
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 1.1e-78 297.0 177 80.2
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 1.8e-78 296.2 177 80.2
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 5.3e-78 294.7 177 80.2
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 3.4e-77 292.0 177 79.7
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 3.0e-73 278.9 176 76.7
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 3.9e-73 278.5 176 74.4
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 8.7e-73 277.3 177 73.4
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 1.1e-72 276.9 176 76.1
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 5.6e-72 274.6 176 76.7
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 1.3e-71 273.5 176 75.0
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 1.3e-71 273.5 176 76.1
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 2.1e-71 272.7 176 75.0
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 2.1e-71 272.7 176 73.9
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 4.8e-71 271.6 176 75.6
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 6.2e-71 271.2 176 75.0
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 6.2e-71 271.2 176 74.4
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 8.2e-71 270.8 175 74.9
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 1.1e-70 270.4 166 78.9
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 1.4e-70 270.0 177 71.8
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 1.4e-70 270.0 176 73.9
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 4.0e-70 268.5 176 73.9
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 9.0e-70 267.3 176 73.3
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 3.4e-69 265.4 176 73.9
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 4.5e-69 265.0 176 72.2
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 7.6e-69 264.2 176 73.3
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 1.0e-68 263.8 177 71.8
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 1.7e-68 263.1 178 72.5
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 2.2e-68 262.7 177 71.8
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 8.4e-68 260.8 177 71.8
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 2.5e-67 259.2 177 69.5
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 2.5e-67 259.2 177 71.2
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 2.5e-67 259.2 177 71.8
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 2.5e-67 259.2 159 76.1
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 3.2e-67 258.8 178 74.7
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 4.2e-67 258.5 157 78.3
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 4.2e-67 258.5 176 71.6
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 5.5e-67 258.1 175 72.6
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 5.5e-67 258.1 167 73.1
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 5.5e-67 258.1 177 71.8
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 7.1e-67 257.7 177 68.9
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 1.2e-66 256.9 176 71.0
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 1.6e-66 256.5 176 69.9
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 2.7e-66 255.8 177 69.5
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 2.7e-66 255.8 176 70.5
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 3.5e-66 255.4 176 70.5
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 7.9e-66 254.2 177 69.5
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 1.3e-65 253.4 178 69.7
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.3e-65 253.4 176 71.0
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 1.3e-65 253.4 176 71.0
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 1.8e-65 253.1 177 71.8
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 2.3e-65 252.7 179 67.6
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 3.0e-65 252.3 177 66.1
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 5.1e-65 251.5 176 69.9
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 6.7e-65 251.1 178 66.9
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 6.7e-65 251.1 177 68.9
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 6.7e-65 251.1 177 65.5
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 1.1e-64 250.4 176 68.8
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 2.5e-64 249.2 176 68.8
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 3.3e-64 248.8 176 71.0
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 4.3e-64 248.4 177 70.6
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 5.7e-64 248.1 177 70.1
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 9.7e-64 247.3 176 69.9
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 1.3e-63 246.9 177 68.4
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 1.3e-63 246.9 176 68.8
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 1.6e-63 246.5 177 69.5
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 1.6e-63 246.5 177 69.5
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.8e-63 245.7 176 67.0
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 4.8e-63 245.0 176 65.9
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 1.8e-62 243.0 157 75.8
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 2.4e-62 242.7 176 65.9
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 2.4e-62 242.7 176 68.2
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 4.1e-62 241.9 177 68.4
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 4.1e-62 241.9 177 67.2
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 5.3e-62 241.5 177 65.5
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 6.9e-62 241.1 157 74.5
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 1.2e-61 240.4 177 68.4
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 2.6e-61 239.2 156 75.6
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 1.0e-60 237.3 184 65.2
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 1.0e-60 237.3 175 65.1
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 1.3e-60 236.9 159 73.0
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 2.2e-60 236.1 177 65.0
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 2.9e-60 235.7 185 64.9
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 3.8e-60 235.3 168 67.9
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 3.8e-60 235.3 156 75.6
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 5.0e-60 235.0 186 67.2
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 6.5e-60 234.6 168 70.2
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 1.1e-59 233.8 187 64.7
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 1.1e-59 233.8 176 63.1
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 1.6e-58 229.9 177 65.5
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.1e-58 229.6 176 63.6
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 1.0e-57 227.3 160 68.8
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 1.4e-57 226.9 156 71.8
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 3.9e-57 225.3 176 61.4
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 5.1e-57 224.9 177 65.0
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 1.1e-56 223.8 177 61.0
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 1.9e-56 223.0 137 78.8
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 3.3e-56 222.2 176 59.7
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 3.3e-56 222.2 178 63.5
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 4.3e-56 221.9 159 66.7
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 5.7e-56 221.5 137 77.4
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 1.7e-55 219.9 158 66.5
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 2.2e-55 219.5 176 59.7
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 6.3e-55 218.0 156 69.2
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.1e-54 217.2 139 77.7
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 3.1e-54 215.7 176 55.7
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 5.3e-54 214.9 154 68.8
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 6.5e-52 208.0 176 59.7
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 6.1e-50 201.4 156 62.2
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 6.1e-50 201.4 176 59.7
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 3.9e-49 198.7 176 56.8
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 8.8e-49 197.6 176 55.7
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 1.5e-48 196.8 156 62.2
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 8.2e-47 191.0 120 79.2
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 3.1e-46 189.1 119 74.8
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 5.3e-46 188.3 175 56.0
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 5.3e-46 188.3 156 60.3
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 1.5e-45 186.8 176 54.0
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 7.7e-45 184.5 176 51.1
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 5.0e-44 181.8 176 52.8
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 1.9e-43 179.9 179 50.8
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 6.1e-42 174.9 177 52.5
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 2.9e-36 156.0 176 46.0
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 5.0e-36 155.2 119 63.9
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.5e-35 153.7 115 67.0
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 3.2e-35 152.5 119 59.7
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 1.7e-31 140.2 104 68.3
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 4.5e-29 132.1 165 47.9
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 3.2e-27 125.9 118 59.3
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 3.1e-14 82.8 59 69.5
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 1.8e-09 67.0 145 28.3
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 1.8e-09 67.0 174 27.0
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 4.0e-09 65.9 163 28.2
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.2e-08 64.3 146 31.5
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 1.5e-08 63.9 170 29.4
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 1.5e-08 63.9 147 32.0
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 2.0e-08 63.5 147 29.3
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 2.6e-08 63.2 168 29.2
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 4.4e-08 62.4 149 27.5
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.4e-08 62.4 145 31.7
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 4.4e-08 62.4 147 27.9
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 4.4e-08 62.4 142 28.9
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 7.5e-08 61.6 145 29.0
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 9.8e-08 61.2 151 29.8
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 9.8e-08 61.2 145 30.3
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.3e-07 60.8 145 30.3
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.3e-07 60.8 142 28.9
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-07 60.8 142 28.9
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-07 60.8 142 28.9
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.3e-07 60.8 151 27.8
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 2.2e-07 60.1 149 29.5
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 2.2e-07 60.1 142 28.9
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 2.9e-07 59.7 145 27.6
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 2.9e-07 59.7 145 27.6
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 3.7e-07 59.3 147 26.5
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 3.7e-07 59.3 147 26.5
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 6.4e-07 58.5 145 29.7
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 8.3e-07 58.2 147 26.5
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 1.1e-06 57.8 147 25.9
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 1.1e-06 57.8 147 25.9
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 1.1e-06 57.8 145 28.3
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 1.1e-06 57.8 145 28.3
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 1.4e-06 57.4 145 28.3
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.4e-06 57.4 145 26.9
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.9e-06 57.0 142 27.5
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.9e-06 57.0 145 26.9
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 1.9e-06 57.0 145 26.9
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.4e-06 56.6 156 28.8
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 2.4e-06 56.6 145 25.5
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 2.4e-06 56.6 147 25.2
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 3.2e-06 56.2 154 26.6
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 3.2e-06 56.2 145 26.2
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 3.2e-06 56.2 146 29.5
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 4.1e-06 55.8 142 28.2
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 7.0e-06 55.1 145 26.2
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 9.2e-06 54.7 142 28.2


User provided reference genes

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