Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 2.9e-265 917.9 440 100.0
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.1e-227 793.1 445 84.3
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 1.4e-222 776.2 445 81.3
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 8.9e-222 773.5 441 81.6
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 2.0e-218 762.3 444 81.1
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 1.0e-217 760.0 431 81.9
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 3.0e-217 758.4 432 80.8
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 5.6e-216 754.2 440 79.5
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 6.2e-215 750.7 431 80.5
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 8.0e-215 750.4 438 80.4
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 8.0e-215 750.4 431 80.5
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 8.0e-215 750.4 441 81.6
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.1e-214 750.0 429 81.6
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 1.8e-214 749.2 431 80.3
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 3.1e-214 748.4 442 79.9
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 5.2e-214 747.7 431 80.3
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 8.3e-212 740.3 434 80.0
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 8.3e-212 740.3 515 70.9
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 2.7e-210 735.3 433 78.8
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.3e-209 732.3 436 79.4
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 6.6e-209 730.7 431 78.2
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 5.8e-205 717.6 441 78.0
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 1.3e-204 716.5 431 77.3
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 2.9e-204 715.3 444 76.6
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 4.1e-203 711.4 436 75.7
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 7.8e-202 707.2 429 77.2
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.3e-201 706.4 433 75.1
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 1.4e-198 696.4 439 73.6
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.4e-198 696.4 440 76.4
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 2.4e-198 695.7 435 75.2
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.5e-197 693.0 432 75.7
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 2.6e-197 692.2 435 75.4
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 4.4e-197 691.4 436 74.1
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 9.9e-197 690.3 439 74.0
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 9.9e-197 690.3 426 76.3
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.7e-196 689.5 437 73.2
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.8e-196 688.3 393 79.9
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 4.9e-196 688.0 433 73.7
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 4.9e-196 688.0 428 75.7
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 4.9e-196 688.0 439 74.0
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 8.4e-196 687.2 437 73.5
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 8.4e-196 687.2 437 73.9
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 8.4e-196 687.2 446 74.4
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 1.1e-195 686.8 458 72.9
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 1.4e-195 686.4 438 74.4
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 1.4e-195 686.4 443 73.6
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.2e-195 684.9 447 73.2
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 7.1e-195 684.1 443 72.7
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 7.1e-195 684.1 452 73.9
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 7.1e-195 684.1 439 73.3
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 9.2e-195 683.7 441 73.7
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 9.2e-195 683.7 405 77.8
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 1.6e-194 682.9 455 73.2
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 4.6e-194 681.4 441 74.6
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 4.6e-194 681.4 424 73.6
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 6.0e-194 681.0 437 72.3
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 6.0e-194 681.0 443 73.6
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.7e-193 679.5 434 74.0
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 2.3e-193 679.1 435 74.0
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 3.9e-193 678.3 430 76.5
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 5.1e-193 677.9 436 73.2
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 5.1e-193 677.9 437 73.7
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 6.6e-193 677.6 441 73.2
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 8.7e-193 677.2 442 72.4
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 8.7e-193 677.2 446 72.4
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 1.1e-192 676.8 446 72.4
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 1.5e-192 676.4 444 73.0
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 1.5e-192 676.4 441 74.1
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 3.3e-192 675.2 441 72.6
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 7.3e-192 674.1 441 72.3
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 7.3e-192 674.1 414 76.1
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 9.6e-192 673.7 454 72.0
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.2e-191 673.3 454 72.0
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 2.8e-191 672.2 443 71.8
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 2.8e-191 672.2 452 71.9
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 3.6e-191 671.8 441 71.9
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 8.1e-191 670.6 458 71.6
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.4e-190 669.8 455 70.8
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 1.4e-190 669.8 440 71.4
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.8e-190 669.5 436 72.0
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.8e-190 669.5 428 72.2
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 1.8e-190 669.5 440 72.0
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 3.1e-190 668.7 444 73.2
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 9.0e-190 667.2 441 71.4
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 9.0e-190 667.2 441 72.3
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.2e-189 666.8 442 72.2
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 1.2e-189 666.8 441 71.4
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.5e-189 666.4 437 72.5
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.6e-189 665.6 451 71.6
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 3.4e-189 665.2 435 73.6
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 4.4e-189 664.8 450 70.4
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 4.4e-189 664.8 441 72.8
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 5.8e-189 664.5 442 71.3
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 7.6e-189 664.1 442 71.7
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 2.9e-188 662.1 443 72.0
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 3.8e-188 661.8 477 67.9
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 4.9e-188 661.4 402 76.4
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 8.4e-188 660.6 441 71.2
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 8.4e-188 660.6 393 77.6
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.1e-187 660.2 448 71.0
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 4.2e-187 658.3 445 72.4
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.6e-186 656.4 440 70.7
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 3.5e-186 655.2 366 81.1
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 3.5e-186 655.2 366 81.1
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 6.0e-186 654.4 436 72.0
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 7.8e-186 654.1 442 70.6
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 7.8e-186 654.1 442 70.6
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.0e-185 653.7 426 73.5
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.7e-185 652.9 442 71.0
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 3.9e-185 651.7 441 70.7
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.5e-184 649.8 438 71.0
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 4.3e-184 648.3 441 70.7
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 8.1e-183 644.0 388 75.8
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 2.0e-181 639.4 432 69.9
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 6.2e-175 617.8 417 69.1
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.4e-173 612.1 436 68.1
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.7e-172 609.8 347 80.4
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 6.4e-172 607.8 322 85.1
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 8.4e-172 607.4 326 84.4
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 6.0e-170 601.3 444 66.9
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 3.7e-159 565.5 408 66.2
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.1e-158 563.9 377 68.2
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 6.5e-156 554.7 291 84.5
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 5.5e-155 551.6 289 84.8
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 7.2e-155 551.2 289 84.8
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 3.6e-154 548.9 340 77.1
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 5.9e-149 531.6 286 82.5
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.7e-149 531.2 393 67.9
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.8e-142 510.0 334 65.9
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 2.6e-141 506.1 270 84.4
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.9e-123 446.8 296 70.3
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 3.6e-122 442.6 378 54.0
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 2.3e-121 439.9 301 71.4
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 2.6e-120 436.4 285 67.0
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.8e-114 416.4 313 67.4
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 4.1e-110 402.5 355 51.0
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.2e-95 353.6 316 51.6
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.3e-89 333.6 332 47.3
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.0e-88 330.5 207 74.9
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 8.7e-68 261.9 139 82.0
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 8.7e-68 261.9 186 68.8
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 6.0e-53 212.6 119 79.8
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.0e-52 211.8 109 86.2
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 5.1e-52 209.5 124 74.2
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 9.0e-49 198.7 127 73.2
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.0e-47 195.3 137 63.5
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.0e-32 144.4 85 77.6
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 5.9e-32 142.9 85 76.5
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 6.7e-28 129.4 80 70.0
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 9.7e-27 125.6 101 60.4
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 3.8e-15 87.0 110 47.3
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.5e-14 84.3 52 73.1


User provided reference genes

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