Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 8.6e-44 179.9 87 100.0
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 7.6e-16 87.0 59 72.9
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 8.4e-15 83.6 78 56.4
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 1.9e-14 82.4 73 58.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.4e-14 82.0 78 57.7
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 2.4e-14 82.0 70 61.4
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.4e-14 80.9 72 58.3
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 9.2e-14 80.1 77 58.4
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.6e-13 79.3 78 56.4
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.6e-13 79.3 78 56.4
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.1e-13 79.0 45 80.0
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 6.0e-13 77.4 78 55.1
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.0e-12 76.6 53 69.8
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-12 76.3 73 54.8
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-12 76.3 73 54.8
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.3e-12 76.3 78 53.8
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 1.3e-12 76.3 70 57.1
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-12 76.3 78 53.8
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 1.7e-12 75.9 73 53.4
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-12 75.9 78 53.8
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 2.3e-12 75.5 71 52.1
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.0e-12 75.1 73 54.8
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 5.1e-12 74.3 52 69.2
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 5.1e-12 74.3 78 52.6
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 5.1e-12 74.3 78 52.6
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 6.6e-12 73.9 73 53.4
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.7e-12 73.6 53 64.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.5e-11 72.0 74 51.4
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 3.3e-11 71.6 84 48.8
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 3.3e-11 71.6 76 52.6
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 7.3e-11 70.5 78 50.0
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 7.3e-11 70.5 78 51.3
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 9.6e-11 70.1 40 77.5
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-10 69.7 78 50.0
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-10 69.7 78 50.0
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-10 69.7 78 50.0
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.3e-10 69.7 78 50.0
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-10 69.3 82 46.3
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 2.1e-10 68.9 45 71.1
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.8e-10 68.6 67 58.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 4.8e-10 67.8 69 55.1
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 4.8e-10 67.8 78 48.7
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 6.2e-10 67.4 78 48.7
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.1e-09 66.6 43 67.4
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 1.4e-09 66.2 38 78.9
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.4e-09 65.5 78 48.7
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-09 65.5 74 50.0
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 3.1e-09 65.1 43 69.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 4.0e-09 64.7 76 50.0
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 5.3e-09 64.3 43 67.4
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-08 63.2 42 69.0
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 1.2e-08 63.2 53 62.3
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.4e-08 61.6 42 69.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 9.9e-08 60.1 69 53.6
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.4e-07 57.4 71 46.5
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 8.4e-07 57.0 82 41.5
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 8.4e-07 57.0 82 41.5
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 1.1e-06 56.6 39 59.0
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.2e-06 54.7 74 40.5


User provided reference genes

Program Settings