Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00982 Erythranthe guttata HOM05D001477 ORTHO05D001182 2.6e-79 298.5 138 100.0
SGA_v2.0_scaffold4G02035 Striga asiatica HOM05D001477 ORTHO05D001182 1.1e-37 160.2 142 52.8
SGA_v2.0_scaffold68G22937 Striga asiatica HOM05D000862 ORTHO05D000943 4.7e-20 101.7 86 54.7
Nitab4.5_0006071g0070 Nicotiana tabacum HOM05D001477 ORTHO05D001182 4.0e-19 98.6 134 36.6
Nitab4.5_0004848g0100 Nicotiana tabacum HOM05D001477 ORTHO05D001182 6.8e-19 97.8 135 36.3
Dinv37940 Davidia involucrata HOM05D001477 ORTHO05D001182 2.0e-18 96.3 115 40.9
Actinidia32125 Actinidia chinensis HOM05D000617 ORTHO05D000229 2.6e-18 95.9 114 38.6
Rhsim08G0230500 Rhododendron simsii HOM05D001477 ORTHO05D001182 1.1e-16 90.5 114 37.7
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 4.1e-16 88.6 117 36.8
Cfa003613 Carpinus fangiana HOM05D001477 ORTHO05D001182 9.2e-16 87.4 117 36.8
vmacro18828 Vaccinium macrocarpon HOM05D001477 ORTHO05D001182 3.5e-15 85.5 124 37.1
Hma1.2p1_0388F.1_g142070 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 1.7e-14 83.2 110 33.6
Peaxi162Scf00038g01239 Petunia axillaris HOM05D001477 ORTHO05D001182 3.0e-14 82.4 134 31.3
FvH4_6g32840 Fragaria vesca HOM05D001477 ORTHO05D001182 3.9e-14 82.0 106 40.6
FAN14G2250 Fragaria x ananassa HOM05D000862 ORTHO05D000943 3.9e-14 82.0 106 39.6
QL93p1866_0198 Quercus lobata HOM05D001477 ORTHO05D001182 3.9e-14 82.0 115 37.4
Prupe.3G053600 Prunus persica HOM05D001477 ORTHO05D001182 1.1e-13 80.5 116 37.9
Gohir.D05G135100 Gossypium hirsutum HOM05D001477 ORTHO05D001182 2.5e-13 79.3 114 36.8
ECA232G5008 Erigeron canadensis HOM05D000862 ORTHO05D000943 3.3e-13 79.0 111 36.0
Gorai.009G138900 Gossypium raimondii HOM05D001477 ORTHO05D001182 5.6e-13 78.2 114 36.8
Sopen03g040100 Solanum pennellii HOM05D001477 ORTHO05D001182 5.6e-13 78.2 133 34.6
PGSC0003DMG400002600 Solanum tuberosum HOM05D001477 ORTHO05D001182 5.6e-13 78.2 133 34.6
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 9.5e-13 77.4 113 37.2
CAN.G1668.1 Capsicum annuum HOM05D001477 ORTHO05D001182 1.2e-12 77.0 113 33.6
Solyc03g121290.4 Solanum lycopersicum HOM05D001477 ORTHO05D001182 1.6e-12 76.6 133 34.6
RcHm_v2.0_Chr2g0142131 Rosa chinensis HOM05D001477 ORTHO05D001182 6.2e-12 74.7 104 40.4
CiPaw.01G227900 Carya illinoinensis HOM05D001477 ORTHO05D001182 1.8e-11 73.2 116 36.2
Eucgr.F03097 Eucalyptus grandis HOM05D001477 ORTHO05D001182 1.8e-11 73.2 115 34.8
Lj3g0011959 Lotus japonicus HOM05D001477 ORTHO05D001182 3.4e-10 68.9 108 37.0
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 4.4e-10 68.6 104 35.6
TPR.G6557 Trifolium pratense HOM05D001477 ORTHO05D001182 5.8e-10 68.2 112 33.0
AUR62022295 Chenopodium quinoa HOM05D001477 ORTHO05D001182 8.3e-09 64.3 114 29.8
EL10Ac9g21142 Beta vulgaris HOM05D001477 ORTHO05D001182 1.4e-08 63.5 124 29.8
arahy.Tifrunner.gnm1.ann1.WE7T8M Arachis hypogaea HOM05D000862 ORTHO05D000943 3.2e-08 62.4 107 35.5
arahy.Tifrunner.gnm1.ann1.Q9TM1C Arachis hypogaea HOM05D000862 ORTHO05D000943 5.4e-08 61.6 107 34.6
Manes.11G029400 Manihot esculenta HOM05D001477 ORTHO05D001182 9.2e-08 60.8 117 32.5
Ah.01g017020 Amaranthus hybridus HOM05D001477 ORTHO05D001182 2.1e-07 59.7 114 28.9
GSVIVG01016843001 Vitis vinifera HOM05D001477 ORTHO05D001182 3.5e-07 58.9 58 43.1
COL.COLO4_07576 Corchorus olitorius HOM05D001477 ORTHO05D001182 3.0e-06 55.8 74 37.8
GSVIVG01016827001 Vitis vinifera HOM05D001477 ORTHO05D001182 3.0e-06 55.8 59 42.4


User provided reference genes

Program Settings