Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 2.0e-83 312.4 157 100.0
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.4e-52 209.9 157 70.7
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 9.1e-44 180.6 157 63.7
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 8.5e-42 174.1 156 64.7
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 4.2e-41 171.8 158 58.9
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 9.4e-41 170.6 157 61.1
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 3.6e-40 168.7 156 60.9
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.6e-40 168.7 156 60.9
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 3.6e-40 168.7 156 62.2
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 6.1e-40 167.9 157 61.8
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 1.8e-39 166.4 159 59.7
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 1.8e-39 166.4 167 61.1
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.8e-39 166.4 156 59.0
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.3e-39 166.0 156 60.9
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.3e-39 166.0 156 60.9
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 2.3e-39 166.0 156 59.6
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 2.0e-38 162.9 159 57.9
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 2.6e-38 162.5 181 55.8
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 4.4e-38 161.8 159 60.4
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 5.7e-38 161.4 155 57.4
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.7e-37 159.8 159 59.7
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.8e-37 159.1 155 58.1
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.7e-37 158.7 153 58.8
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 4.8e-37 158.3 159 58.5
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.8e-36 156.4 162 57.4
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 2.4e-36 156.0 160 58.8
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 2.4e-36 156.0 153 60.8
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 3.1e-36 155.6 159 58.5
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 4.1e-36 155.2 159 57.9
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 5.3e-36 154.8 158 58.2
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 7.0e-36 154.5 155 57.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 1.6e-35 153.3 155 59.4
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 2.6e-35 152.5 155 56.8
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 4.5e-35 151.8 158 58.9
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 4.5e-35 151.8 164 56.1
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 5.9e-35 151.4 155 58.7
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 7.7e-35 151.0 158 58.9
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 1.0e-34 150.6 158 57.0
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.0e-34 150.6 160 58.8
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.3e-34 150.2 160 55.6
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.7e-34 149.8 155 58.1
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 2.9e-34 149.1 159 54.7
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 6.5e-34 147.9 132 58.3
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.1e-33 147.1 123 66.7
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.9e-33 146.4 160 55.0
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 2.5e-33 146.0 155 57.4
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 2.5e-33 146.0 95 77.9
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 3.2e-33 145.6 158 55.7
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 7.2e-33 144.4 158 57.0
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 2.7e-32 142.5 163 51.5
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 3.6e-32 142.1 158 54.4
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 4.7e-32 141.7 160 53.8
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 4.7e-32 141.7 161 51.6
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 4.7e-32 141.7 156 56.4
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 8.0e-32 141.0 155 54.8
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.4e-31 140.2 160 53.8
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 1.8e-31 139.8 155 52.3
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.8e-31 139.8 152 52.0
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.8e-31 139.8 157 54.1
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 2.3e-31 139.4 161 56.5
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 4.0e-31 138.7 161 53.4
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 4.0e-31 138.7 165 50.3
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 6.7e-31 137.9 159 49.1
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 6.7e-31 137.9 155 54.8
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.0e-30 136.3 160 51.9
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 2.0e-30 136.3 160 51.9
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 3.3e-30 135.6 160 53.1
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 4.4e-30 135.2 115 67.0
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 7.5e-30 134.4 160 51.2
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 7.5e-30 134.4 158 50.0
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 7.5e-30 134.4 166 50.6
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 9.7e-30 134.0 160 51.2
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 1.3e-29 133.7 163 50.3
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.3e-29 133.7 155 52.3
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.3e-29 133.7 162 51.2
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 1.3e-29 133.7 148 56.1
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 2.8e-29 132.5 160 51.2
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 2.8e-29 132.5 155 52.9
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 2.8e-29 132.5 157 51.6
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 3.7e-29 132.1 157 52.9
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 6.3e-29 131.3 163 50.3
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 6.3e-29 131.3 163 50.3
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 8.2e-29 131.0 115 64.3
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.4e-28 130.2 173 50.3
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.4e-28 130.2 135 54.8
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.8e-28 129.8 159 50.9
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 3.1e-28 129.0 164 50.0
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 3.1e-28 129.0 161 50.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 4.1e-28 128.6 169 52.1
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 7.0e-28 127.9 171 48.0
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 7.0e-28 127.9 153 49.7
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 7.7e-27 124.4 131 54.2
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 1.0e-26 124.0 161 47.2
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 1.0e-26 124.0 157 51.0
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.8e-26 122.1 159 50.9
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 2.5e-25 119.4 182 44.5
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 6.1e-24 114.8 162 45.7
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 4.0e-23 112.1 131 49.6
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 8.8e-23 110.9 133 51.1
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 1.2e-22 110.5 90 63.3
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.5e-22 110.2 158 44.3
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 4.4e-22 108.6 133 49.6
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 9.8e-22 107.5 141 46.1
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.3e-21 107.1 135 46.7
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 4.5e-19 98.6 141 45.4
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 4.5e-19 98.6 142 45.1
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 3.8e-18 95.5 100 53.0
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 1.2e-16 90.5 103 53.4
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 6.8e-15 84.7 131 43.5
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.7e-13 80.1 58 67.2
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.7e-13 80.1 133 41.4
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 3.7e-13 79.0 101 45.5
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 6.3e-13 78.2 155 41.3
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 4.1e-12 75.5 137 38.0
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 5.4e-12 75.1 186 37.6
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 1.6e-11 73.6 103 42.7
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 2.3e-10 69.7 74 54.1
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 2.3e-10 69.7 72 51.4
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 2.9e-10 69.3 50 68.0
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 1.5e-09 67.0 106 40.6
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 1.6e-08 63.5 57 56.1
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 2.8e-08 62.8 100 42.0
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 2.8e-08 62.8 51 58.8
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 1.4e-07 60.5 58 51.7
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 8.9e-07 57.8 105 40.0
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.5e-06 57.0 42 66.7
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 1.5e-06 57.0 104 35.6


User provided reference genes

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