Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 0.0e+00 1226.8 836 100.0
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 8.5e-149 531.9 849 57.8
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 7.8e-134 482.3 921 53.7
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 1.2e-89 335.5 916 47.9
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 8.4e-88 329.3 897 45.7
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 5.5e-87 326.6 903 47.5
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 3.5e-86 323.9 879 47.8
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 3.5e-86 323.9 879 47.8
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 2.8e-83 314.3 885 47.1
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 1.0e-80 305.8 920 43.0
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 1.7e-80 305.1 915 47.5
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 3.0e-77 294.3 906 47.4
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 1.5e-76 292.0 924 48.2
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 1.6e-75 288.5 924 45.0
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.6e-75 288.5 939 46.5
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 4.1e-74 283.9 810 45.6
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 5.3e-74 283.5 884 45.9
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.5e-73 282.0 940 46.7
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 2.5e-71 274.6 944 44.9
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 3.2e-71 274.2 910 44.6
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 1.2e-70 272.3 988 42.7
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 2.1e-70 271.6 899 44.5
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 3.0e-69 267.7 967 42.5
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 3.9e-69 267.3 307 55.0
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 1.9e-68 265.0 941 43.3
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 3.3e-68 264.2 228 67.1
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 7.4e-68 263.1 295 56.9
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 6.3e-67 260.0 930 44.9
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 2.4e-66 258.1 881 46.7
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 2.4e-66 258.1 250 59.2
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 3.1e-66 257.7 250 59.6
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 5.3e-66 256.9 295 55.3
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 1.2e-65 255.8 966 43.1
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 2.6e-65 254.6 930 44.1
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 7.7e-65 253.1 891 46.6
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 1.0e-64 252.7 316 52.5
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.3e-64 252.3 943 43.1
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 1.7e-64 251.9 306 54.6
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 6.5e-64 250.0 886 45.3
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 1.1e-63 249.2 309 53.1
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 3.2e-63 247.7 928 42.9
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 9.4e-63 246.1 902 43.7
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 1.2e-62 245.7 879 44.6
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 1.6e-62 245.4 147 82.3
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 2.7e-62 244.6 247 59.9
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 4.6e-62 243.8 232 67.2
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 4.6e-62 243.8 294 52.7
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 7.9e-62 243.0 143 85.3
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 1.0e-61 242.7 820 42.4
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 1.8e-61 241.9 286 58.4
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 3.9e-61 240.7 930 43.4
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 6.7e-61 240.0 309 51.8
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 4.4e-60 237.3 280 54.6
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 7.4e-60 236.5 924 38.7
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 9.7e-60 236.1 799 42.9
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 1.7e-59 235.3 247 56.3
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 2.2e-59 235.0 136 86.0
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 2.8e-59 234.6 246 58.1
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 3.7e-59 234.2 264 56.8
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 4.8e-59 233.8 147 81.0
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 6.3e-59 233.4 324 51.9
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 6.3e-59 233.4 917 41.7
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 8.2e-59 233.0 151 79.5
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 1.1e-58 232.6 248 62.1
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 3.1e-58 231.1 134 85.8
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 4.1e-58 230.7 146 79.5
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 9.1e-58 229.6 147 78.2
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 1.2e-57 229.2 315 54.0
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 2.0e-57 228.4 950 40.9
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 2.0e-57 228.4 917 41.2
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 2.0e-57 228.4 901 44.7
SalBow6G2010 Salvia bowleyana HOM05D005166 ORTHO05D006120 2.6e-57 228.0 419 50.6
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 7.7e-57 226.5 135 83.7
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 7.7e-57 226.5 249 55.4
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 1.0e-56 226.1 953 43.2
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 1.3e-56 225.7 952 42.0
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 2.2e-56 224.9 277 54.2
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 2.9e-56 224.6 956 42.3
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 3.8e-56 224.2 976 43.6
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 3.8e-56 224.2 250 52.8
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 3.8e-56 224.2 250 52.8
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.1e-55 222.6 912 42.5
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 2.5e-55 221.5 248 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 7.2e-55 219.9 271 51.3
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 7.2e-55 219.9 290 51.0
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 9.4e-55 219.5 910 42.2
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.2e-54 219.2 894 41.8
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 1.2e-54 219.2 242 52.9
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 3.6e-54 217.6 943 41.4
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 1.4e-53 215.7 940 43.0
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 5.2e-53 213.8 212 59.0
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 6.7e-53 213.4 906 41.5
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 1.1e-52 212.6 143 74.1
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 1.1e-52 212.6 906 45.7
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 4.4e-52 210.7 156 71.2
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 4.4e-52 210.7 920 41.4
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 4.4e-52 210.7 934 44.3
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 7.4e-52 209.9 156 71.2
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 7.4e-52 209.9 131 77.9
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 2.2e-51 208.4 920 44.3
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.8e-50 205.3 898 44.2
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 1.8e-50 205.3 180 62.2
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 2.6e-49 201.4 294 50.3
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 3.8e-48 197.6 155 65.2
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 6.5e-48 196.8 286 49.7
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 8.5e-48 196.4 934 41.0
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.9e-47 195.3 113 83.2
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 2.5e-47 194.9 963 39.7
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 5.5e-47 193.7 150 66.7
Oeu053892.1 Olea europaea HOM05D005166 ORTHO05D006120 2.1e-46 191.8 428 46.0
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 2.1e-46 191.8 134 72.4
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 2.6e-44 184.9 854 33.6
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 4.4e-44 184.1 968 40.5
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 7.5e-44 183.3 896 41.2
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 3.6e-38 164.5 248 46.4
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 2.2e-35 155.2 890 40.6
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 7.0e-34 150.2 131 59.5
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 4.2e-31 141.0 134 60.4
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 7.2e-31 140.2 117 61.5
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 2.1e-30 138.7 811 30.3
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 3.0e-29 134.8 114 62.3
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 5.4e-26 124.0 161 48.4
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 7.8e-25 120.2 128 52.3
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 1.9e-23 115.5 813 39.5
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 4.0e-21 107.8 127 48.0
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 5.9e-17 94.0 70 71.4
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 6.2e-14 84.0 66 68.2
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 8.0e-14 83.6 57 73.7
HanXRQChr08g0237461 Helianthus annuus HOM05D005166 ORTHO05D006120 2.3e-08 65.5 50 68.0
PRCOL_00003490 Prasinoderma coloniale HOM05D005166 ORTHO05D006120 2.3e-08 65.5 108 37.0


User provided reference genes

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