Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 7.1e-104 380.6 187 100.0
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.1e-43 178.7 185 53.0
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.6e-42 176.8 203 51.7
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.0e-41 174.1 185 51.4
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 3.3e-40 169.1 186 53.2
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 3.3e-40 169.1 185 50.8
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.1e-39 166.4 188 52.1
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.7e-39 165.2 187 50.8
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 6.8e-38 161.4 186 47.8
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 8.9e-38 161.0 184 50.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.5e-37 160.2 188 49.5
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 1.5e-37 160.2 186 48.9
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 3.4e-37 159.1 187 48.7
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 4.4e-37 158.7 186 47.8
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 5.7e-37 158.3 184 48.9
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 5.7e-37 158.3 186 46.8
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 7.5e-37 157.9 182 47.8
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.3e-36 157.1 182 50.0
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 1.3e-36 157.1 186 46.8
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.7e-36 156.8 175 50.3
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 6.4e-36 154.8 185 48.6
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-35 154.1 186 47.8
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.1e-35 154.1 183 47.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 3.2e-35 152.5 187 49.2
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 3.2e-35 152.5 183 45.4
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 4.1e-35 152.1 185 44.3
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 5.4e-35 151.8 185 48.6
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 1.0e-33 147.5 188 45.7
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.3e-33 147.1 181 47.0
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-33 147.1 185 45.9
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.7e-33 146.7 194 44.3
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 3.9e-33 145.6 183 47.0
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 6.6e-33 144.8 185 45.4
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.3e-32 142.5 186 45.7
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 3.3e-32 142.5 181 44.2
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 4.3e-32 142.1 178 47.8
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 7.3e-32 141.4 190 43.2
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 7.3e-32 141.4 183 47.0
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.2e-31 140.6 179 46.4
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 1.6e-31 140.2 182 48.9
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 2.8e-31 139.4 105 62.9
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 4.7e-31 138.7 103 64.1
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 6.2e-31 138.3 193 44.0
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 4.0e-30 135.6 188 43.6
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 4.0e-30 135.6 177 46.9
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 5.2e-30 135.2 193 43.0
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 5.2e-30 135.2 187 43.9
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 6.8e-30 134.8 194 43.3
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 8.9e-30 134.4 174 46.6
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.2e-29 134.0 103 64.1
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.2e-29 134.0 186 44.6
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.5e-29 133.7 186 45.7
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.6e-29 132.9 159 48.4
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.4e-29 132.5 159 48.4
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 4.4e-29 132.1 193 44.6
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 5.8e-29 131.7 177 42.9
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 7.5e-29 131.3 117 56.4
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 9.8e-29 131.0 184 45.1
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.7e-28 130.2 193 44.6
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.9e-28 129.4 179 44.7
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.7e-28 129.0 186 43.5
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 6.4e-28 128.3 192 41.1
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 6.4e-28 128.3 191 41.9
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 6.4e-28 128.3 179 42.5
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.1e-27 127.5 109 56.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.9e-27 126.7 109 58.7
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.9e-27 126.7 192 43.2
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.4e-27 126.3 194 42.3
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.2e-27 125.9 159 46.5
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 4.1e-27 125.6 183 41.5
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 5.4e-27 125.2 109 54.1
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 7.0e-27 124.8 199 41.2
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 7.0e-27 124.8 106 60.4
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 9.2e-27 124.4 197 43.7
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.2e-26 124.0 204 42.2
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.6e-26 123.6 196 40.3
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 2.0e-26 123.2 187 41.7
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 2.7e-26 122.9 193 39.4
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.7e-26 122.9 192 40.1
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 3.5e-26 122.5 192 39.6
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 3.5e-26 122.5 107 58.9
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 4.6e-26 122.1 88 64.8
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 7.8e-26 121.3 194 39.2
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 7.8e-26 121.3 112 54.5
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.3e-25 120.6 88 65.9
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 1.7e-25 120.2 194 38.7
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.7e-25 120.2 105 56.2
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 2.3e-25 119.8 108 55.6
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-25 119.8 200 40.0
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-25 119.8 194 42.3
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 3.0e-25 119.4 195 38.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.9e-25 119.0 197 43.7
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.5e-24 117.1 100 60.0
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 1.9e-24 116.7 193 39.4
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 2.5e-24 116.3 193 39.4
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 3.3e-24 115.9 171 42.7
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 7.3e-24 114.8 94 58.5
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 9.5e-24 114.4 203 37.9
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.2e-23 114.0 199 37.7
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 2.1e-23 113.2 90 61.1
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.2e-23 111.7 125 49.6
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 6.2e-23 111.7 125 49.6
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 6.2e-23 111.7 92 58.7
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 6.2e-23 111.7 102 55.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 8.1e-23 111.3 108 53.7
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 2.6e-21 106.3 114 51.8
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 9.8e-21 104.4 80 60.0
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 3.7e-20 102.4 200 36.5
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.4e-19 100.5 220 32.7
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.4e-19 100.5 93 54.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 2.4e-19 99.8 247 30.8
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 3.2e-19 99.4 87 58.6
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 4.1e-19 99.0 175 37.1
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 7.1e-19 98.2 179 36.3
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.2e-18 97.4 209 33.0
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.7e-18 96.3 122 42.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 4.6e-18 95.5 63 66.7
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 7.8e-18 94.7 176 38.1
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 2.3e-17 93.2 62 62.9
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 8.6e-17 91.3 145 38.6
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 8.6e-17 91.3 185 35.1
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.5e-16 90.5 192 32.8
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 3.3e-16 89.4 67 53.7
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 5.6e-16 88.6 135 40.0
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 2.1e-15 86.7 153 32.7
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 1.1e-14 84.3 153 32.0
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 6.8e-14 81.6 67 50.7
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 6.8e-14 81.6 67 50.7
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 6.8e-14 81.6 67 50.7
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 6.8e-14 81.6 67 50.7
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.5e-13 80.5 62 58.1
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.2e-07 60.8 61 39.3
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.7e-07 58.9 164 35.4


User provided reference genes

Program Settings