Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.3e-151 539.7 258 100.0
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.3e-108 396.0 260 70.8
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.8e-97 359.8 261 65.9
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.2e-95 352.8 317 58.0
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 5.6e-91 338.2 261 61.3
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 2.0e-88 329.7 262 62.2
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 4.9e-87 325.1 261 59.0
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 6.4e-87 324.7 260 60.4
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 6.4e-87 324.7 262 61.5
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.1e-86 323.9 247 61.1
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.2e-86 322.4 261 60.9
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 3.2e-86 322.4 251 58.6
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 5.4e-86 321.6 249 60.6
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 5.4e-86 321.6 249 60.6
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.1e-86 321.2 261 60.2
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 9.2e-86 320.9 254 60.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.6e-85 320.1 254 61.0
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.0e-84 317.4 263 57.8
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 8.6e-84 314.3 253 59.3
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 7.3e-83 311.2 248 60.5
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.6e-82 310.1 251 58.2
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.1e-82 309.7 247 57.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.8e-82 309.3 263 59.3
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 8.1e-82 307.8 260 57.3
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.0e-81 305.4 248 58.5
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.7e-79 300.1 247 59.1
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 5.4e-78 295.0 257 54.1
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 9.3e-78 294.3 230 61.7
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 9.3e-78 294.3 260 55.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 9.3e-78 294.3 252 55.6
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.2e-77 293.9 263 56.7
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 4.6e-77 292.0 259 57.1
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 6.0e-77 291.6 259 52.9
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.7e-76 290.0 250 58.8
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 6.6e-76 288.1 254 56.7
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 9.6e-75 284.3 254 56.3
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 9.6e-75 284.3 240 55.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.8e-74 282.0 261 56.7
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 6.2e-74 281.6 258 56.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.5e-72 276.9 263 51.3
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 5.8e-72 275.0 364 40.4
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 7.6e-72 274.6 280 48.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 7.6e-72 274.6 267 49.8
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.3e-71 273.9 257 53.3
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.7e-71 273.5 228 61.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 4.9e-71 271.9 257 52.9
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 2.4e-70 269.6 247 52.2
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 2.7e-69 266.2 267 51.7
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 3.5e-69 265.8 249 51.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 7.9e-69 264.6 236 51.3
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 8.7e-68 261.2 246 51.6
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.1e-67 260.8 255 50.6
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.5e-67 260.4 246 52.0
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.6e-66 256.9 211 57.8
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 2.1e-66 256.5 236 53.0
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.4e-65 253.8 256 49.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 4.0e-65 252.3 236 51.3
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 4.0e-65 252.3 247 51.0
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 4.0e-65 252.3 250 50.0
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 4.0e-65 252.3 231 50.2
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 9.0e-65 251.1 247 49.8
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.5e-64 250.4 257 48.6
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 4.5e-64 248.8 257 49.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 9.9e-64 247.7 256 48.4
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.3e-63 247.3 246 50.0
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.7e-63 246.9 250 49.6
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 2.2e-63 246.5 247 51.4
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 3.8e-63 245.7 246 49.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 3.8e-63 245.7 246 49.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 3.8e-63 245.7 246 49.6
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 4.9e-63 245.4 244 46.3
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.8e-60 236.9 246 48.4
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 5.1e-60 235.3 216 51.4
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 6.7e-60 235.0 248 48.8
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 4.3e-59 232.3 197 56.9
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 3.7e-58 229.2 271 44.3
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.1e-57 227.6 198 56.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 1.1e-57 227.6 318 41.2
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 4.0e-57 225.7 180 60.6
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.5e-56 223.8 237 48.5
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.0e-55 221.1 236 48.3
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.3e-55 220.7 178 54.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 7.4e-51 204.9 254 43.3
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 7.4e-51 204.9 238 42.0
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.1e-50 203.4 254 43.3
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 4.8e-50 202.2 195 51.3
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 4.8e-50 202.2 266 42.1
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 8.2e-50 201.4 141 66.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 9.0e-49 198.0 246 43.5
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 3.2e-46 189.5 263 41.8
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.3e-44 184.1 234 42.7
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 5.1e-36 155.6 265 41.1
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 8.2e-34 148.3 156 47.4
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 5.5e-30 135.6 147 49.0
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 9.4e-30 134.8 175 42.3
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 8.8e-28 128.3 246 33.7
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 5.3e-25 119.0 244 32.0
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 6.5e-23 112.1 203 29.6
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 8.5e-23 111.7 212 34.9
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.4e-20 104.4 244 30.7
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.3e-18 97.8 169 34.9
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.4e-17 94.4 135 38.5
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.8e-17 94.0 76 60.5
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 6.5e-15 85.5 114 41.2
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 2.9e-07 60.1 37 75.7


User provided reference genes

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