Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 7.4e-92 340.5 170 100.0
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 1.3e-64 250.0 175 73.1
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.0e-61 240.4 182 69.8
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 2.0e-60 236.1 149 79.2
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 2.4e-58 229.2 212 60.8
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 1.5e-55 219.9 171 63.2
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 9.8e-52 207.2 168 63.1
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.2e-41 173.7 173 55.5
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 3.5e-41 172.2 170 54.1
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 3.5e-41 172.2 174 54.6
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.3e-40 170.2 171 56.1
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 3.0e-40 169.1 167 57.5
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 3.0e-40 169.1 170 56.5
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 5.0e-40 168.3 169 55.6
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 6.6e-40 167.9 171 55.6
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.9e-39 166.4 169 54.4
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 5.2e-37 158.3 169 53.8
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.2e-36 157.1 166 50.6
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.5e-36 156.8 171 48.5
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 4.4e-36 155.2 173 51.4
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 2.2e-35 152.9 180 47.8
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 2.2e-35 152.9 180 47.8
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 8.3e-35 151.0 168 54.2
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 2.4e-34 149.4 172 49.4
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 7.1e-34 147.9 172 49.4
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.0e-32 144.1 170 47.1
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 1.3e-32 143.7 172 50.0
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.0e-32 142.5 177 49.7
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 6.6e-32 141.4 173 50.3
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.1e-31 140.6 168 51.2
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 2.5e-31 139.4 171 49.7
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 4.3e-31 138.7 166 49.4
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 1.6e-30 136.7 171 46.8
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 1.6e-30 136.7 176 46.6
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 2.8e-30 136.0 167 48.5
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 8.1e-30 134.4 173 49.1
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 8.1e-30 134.4 174 47.7
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.1e-29 134.0 178 45.5
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.1e-29 134.0 166 47.6
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 1.4e-29 133.7 165 44.2
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.4e-29 133.7 174 47.7
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 1.4e-29 133.7 174 47.7
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 2.3e-29 132.9 174 47.7
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 3.1e-29 132.5 112 56.2
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 5.2e-29 131.7 177 45.8
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 1.5e-28 130.2 171 44.4
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 2.0e-28 129.8 178 44.9
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 3.4e-28 129.0 167 47.3
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 4.4e-28 128.6 178 43.3
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 5.8e-28 128.3 205 40.0
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 9.9e-28 127.5 172 45.9
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 1.3e-27 127.1 178 42.7
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 2.2e-27 126.3 173 45.7
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 2.2e-27 126.3 223 39.0
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 2.9e-27 125.9 164 47.6
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.8e-27 125.6 178 43.3
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 6.4e-27 124.8 164 47.6
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.1e-26 124.0 178 42.1
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 1.1e-26 124.0 174 44.8
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 1.4e-26 123.6 172 45.3
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 1.9e-26 123.2 164 47.6
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 1.9e-26 123.2 166 44.6
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 2.4e-26 122.9 167 46.7
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 4.1e-26 122.1 165 42.4
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 7.1e-26 121.3 180 43.9
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 2.1e-25 119.8 224 37.1
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 6.0e-25 118.2 164 47.0
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 7.8e-25 117.9 194 41.2
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 1.7e-24 116.7 151 46.4
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 8.6e-24 114.4 147 44.9
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 8.6e-24 114.4 173 42.2
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 1.1e-23 114.0 144 47.2
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 1.5e-23 113.6 112 50.0
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.5e-23 113.6 173 42.2
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.9e-23 113.2 166 44.0
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 3.3e-23 112.5 172 41.9
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.6e-22 110.2 173 41.0
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 2.1e-22 109.8 161 46.0
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 4.7e-22 108.6 153 42.5
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.1e-21 107.5 162 45.1
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.4e-21 107.1 155 42.6
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 5.2e-21 105.1 153 43.1
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.2e-20 104.0 149 40.9
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.6e-20 102.8 144 43.8
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 2.6e-20 102.8 134 44.8
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.7e-19 100.1 218 35.3
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 2.9e-19 99.4 128 42.2
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 3.8e-19 99.0 106 50.9
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 7.1e-18 94.7 131 42.0
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 2.7e-17 92.8 104 51.0
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 1.7e-16 90.1 144 36.8
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.7e-16 90.1 100 52.0
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 5.6e-15 85.1 142 36.6
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 5.6e-15 85.1 140 40.0
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 7.3e-15 84.7 125 39.2
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 7.3e-15 84.7 153 37.3
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 4.8e-14 82.0 132 40.9
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 2.0e-12 76.6 64 53.1
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 4.9e-11 72.0 139 38.8
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 4.9e-11 72.0 142 38.7
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 4.2e-10 68.9 139 36.0
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 4.2e-10 68.9 160 34.4
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 2.1e-09 66.6 139 36.0
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 6.0e-09 65.1 148 33.8
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 1.1e-07 60.8 142 36.6
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 3.3e-07 59.3 159 30.8


User provided reference genes

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