Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.5e-85 319.7 183 100.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 2.5e-29 132.9 172 49.4
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 3.8e-25 119.0 164 44.5
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.2e-23 114.0 171 42.7
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 6.0e-23 111.7 168 43.5
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-21 107.5 158 43.0
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-21 107.5 158 43.0
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.4e-21 104.8 159 46.5
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.4e-21 104.8 159 46.5
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 9.6e-21 104.4 162 42.6
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.6e-20 103.6 162 39.5
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 4.8e-20 102.1 158 41.8
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.1e-19 100.9 172 43.6
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 3.1e-19 99.4 171 36.8
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 6.9e-19 98.2 150 42.0
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 6.9e-19 98.2 115 53.0
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 6.9e-19 98.2 165 40.6
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 6.9e-19 98.2 158 43.7
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 9.0e-19 97.8 164 41.5
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 1.5e-18 97.1 175 40.6
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.0e-18 96.7 173 38.7
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.6e-18 96.3 171 39.8
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 3.4e-18 95.9 179 38.5
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 3.4e-18 95.9 169 39.1
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 5.8e-18 95.1 170 38.2
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 7.6e-18 94.7 159 37.7
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.6e-18 94.7 158 41.8
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.0e-17 94.4 170 37.6
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.3e-17 94.0 165 38.2
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-17 94.0 167 38.3
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.7e-17 93.6 161 39.8
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.7e-17 93.6 158 41.8
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 2.2e-17 93.2 183 36.6
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.2e-17 93.2 160 38.8
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 3.8e-17 92.4 177 37.9
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.8e-17 92.4 167 38.9
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.8e-17 92.4 156 42.9
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 4.9e-17 92.0 168 46.4
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.9e-17 92.0 157 38.2
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 6.5e-17 91.7 164 40.2
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 8.4e-17 91.3 161 37.3
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 8.4e-17 91.3 156 39.7
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 8.4e-17 91.3 168 37.5
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.4e-16 90.5 167 37.7
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.9e-16 90.1 155 37.4
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 2.5e-16 89.7 168 36.9
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 3.2e-16 89.4 155 41.3
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.2e-16 89.4 157 36.9
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 3.2e-16 89.4 155 39.4
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.2e-16 89.0 174 39.7
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 4.2e-16 89.0 162 38.3
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 5.5e-16 88.6 165 41.2
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.5e-16 88.6 163 39.9
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.5e-16 88.6 160 38.8
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.5e-16 88.6 165 41.2
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.5e-16 88.6 157 36.9
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 7.1e-16 88.2 163 36.8
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 7.1e-16 88.2 172 37.2
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.2e-15 87.4 134 41.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 1.2e-15 87.4 171 36.8
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-15 87.0 159 38.4
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 2.7e-15 86.3 165 37.6
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.5e-15 85.9 163 37.4
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.6e-15 85.5 181 34.8
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 6.0e-15 85.1 156 38.5
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 6.0e-15 85.1 160 36.9
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 7.9e-15 84.7 159 37.1
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.0e-14 84.3 165 35.8
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 1.3e-14 84.0 158 38.6
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 1.8e-14 83.6 159 38.4
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 1.8e-14 83.6 179 33.5
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.3e-14 83.2 172 34.9
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.3e-14 83.2 160 40.6
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-14 83.2 159 38.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 2.3e-14 83.2 166 37.3
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.0e-14 82.8 159 38.4
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 3.0e-14 82.8 162 37.0
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 3.9e-14 82.4 163 38.0
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 3.9e-14 82.4 165 37.6
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 3.9e-14 82.4 159 36.5
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 6.7e-14 81.6 150 42.0
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 8.7e-14 81.3 171 35.7
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.1e-13 80.9 171 38.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.1e-13 80.9 159 36.5
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.9e-13 80.1 166 36.7
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.9e-13 80.1 164 34.1
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 1.9e-13 80.1 168 36.9
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.5e-13 79.7 168 36.9
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 2.5e-13 79.7 132 40.9
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.3e-13 79.3 151 36.4
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.3e-13 79.0 172 32.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.7e-13 78.6 120 43.3
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 7.4e-13 78.2 109 47.7
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.3e-12 77.4 163 42.9
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 4.8e-12 75.5 129 39.5
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 6.3e-12 75.1 162 36.4
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.1e-11 74.3 162 35.8
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.4e-11 73.9 171 32.7
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 1.8e-11 73.6 162 34.0
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-11 72.8 103 44.7
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 5.3e-11 72.0 167 33.5
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 6.9e-11 71.6 160 35.6
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 6.9e-11 71.6 166 35.5
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 9.0e-11 71.2 119 42.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.5e-10 70.5 168 33.9
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.7e-10 68.2 121 38.8
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.0e-09 67.8 123 38.2
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 2.9e-09 66.2 166 34.3
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 5.0e-09 65.5 105 44.8
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 5.0e-09 65.5 120 45.0
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 6.5e-09 65.1 173 33.5
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 6.5e-09 65.1 160 33.1
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 8.5e-09 64.7 118 37.3
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.1e-08 64.3 168 35.7
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.9e-08 63.5 121 39.7
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 2.5e-08 63.2 160 32.5
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.5e-08 63.2 117 40.2
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.2e-08 62.8 111 38.7
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 7.2e-08 61.6 38 71.1
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 9.4e-08 61.2 163 34.4
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 2.1e-07 60.1 178 33.1
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 2.7e-07 59.7 153 34.6
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 3.6e-07 59.3 152 33.6
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 3.6e-07 59.3 162 33.3
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 3.6e-07 59.3 162 33.3
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 4.6e-07 58.9 151 33.8
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 4.6e-07 58.9 151 33.8
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 3.0e-06 56.2 160 31.9
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 3.0e-06 56.2 170 32.4
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 3.0e-06 56.2 65 47.7
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.9e-06 55.8 98 41.8
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.9e-06 55.8 152 29.6
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.9e-06 55.8 153 31.4
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 8.8e-06 54.7 152 29.6


User provided reference genes

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