Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 6.0e-214 747.3 387 100.0
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 2.5e-151 539.3 379 77.0
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 4.0e-149 531.9 380 77.1
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 8.5e-144 514.2 364 76.9
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 8.0e-142 507.7 357 77.6
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 3.0e-141 505.8 373 73.7
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 4.0e-141 505.4 372 74.2
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.2e-141 505.0 355 77.2
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 3.4e-140 502.3 301 87.7
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.7e-140 501.5 307 85.0
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 9.8e-140 500.7 374 72.7
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.3e-139 500.4 344 78.2
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 1.7e-139 500.0 385 73.2
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 6.3e-139 498.0 325 81.5
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 2.4e-138 496.1 381 73.2
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 5.4e-138 495.0 385 72.5
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 1.6e-137 493.4 376 72.3
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 2.7e-137 492.7 378 72.2
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 5.9e-137 491.5 306 83.3
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 5.9e-137 491.5 358 75.4
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.0e-136 490.7 303 82.8
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 1.0e-136 490.7 351 74.9
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 1.3e-136 490.3 324 79.3
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 2.3e-136 489.6 355 74.9
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 5.0e-136 488.4 311 80.7
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 5.0e-136 488.4 302 83.8
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 6.6e-136 488.0 381 70.6
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.1e-135 487.3 304 82.6
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 1.1e-135 487.3 377 70.3
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 1.5e-135 486.9 301 85.0
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.5e-135 486.9 311 81.4
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 2.5e-135 486.1 304 82.6
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.3e-135 485.7 377 70.0
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.3e-135 485.7 296 85.1
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 3.3e-135 485.7 313 81.2
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 4.2e-135 485.3 367 71.9
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 5.5e-135 485.0 311 80.7
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 5.5e-135 485.0 311 80.7
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 7.2e-135 484.6 311 80.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 7.2e-135 484.6 311 80.7
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 7.2e-135 484.6 311 80.7
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 2.1e-134 483.0 312 80.4
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 2.1e-134 483.0 303 82.5
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 2.8e-134 482.6 374 70.6
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 2.8e-134 482.6 311 79.7
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 2.8e-134 482.6 299 82.9
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 3.6e-134 482.3 304 80.6
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 4.7e-134 481.9 306 82.4
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 6.1e-134 481.5 380 69.7
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 1.8e-133 479.9 311 79.7
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 1.8e-133 479.9 359 73.3
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.3e-133 479.6 377 69.5
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.3e-133 479.6 377 69.5
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.3e-133 479.6 321 80.4
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 3.0e-133 479.2 368 71.5
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 3.0e-133 479.2 304 80.3
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 4.0e-133 478.8 367 71.9
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 5.2e-133 478.4 314 79.3
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 5.2e-133 478.4 314 79.0
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 6.8e-133 478.0 305 81.0
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 1.2e-132 477.2 304 82.6
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 1.5e-132 476.9 323 78.3
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 5.7e-132 474.9 306 78.8
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 9.8e-132 474.2 342 74.0
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 2.2e-131 473.0 305 79.3
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 3.7e-131 472.2 373 70.8
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 5.4e-130 468.4 406 67.2
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 4.5e-129 465.3 328 78.0
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 4.5e-129 465.3 349 71.9
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 1.0e-128 464.2 314 77.7
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.3e-128 463.8 376 69.4
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 5.0e-128 461.8 305 80.0
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 5.0e-128 461.8 315 76.8
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 3.3e-127 459.1 340 72.1
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 2.1e-126 456.4 297 80.8
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 2.1e-126 456.4 344 72.7
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 8.0e-126 454.5 321 75.7
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 3.0e-125 452.6 372 69.9
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 4.0e-125 452.2 286 82.5
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 8.9e-125 451.1 289 81.7
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 8.9e-125 451.1 355 67.9
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 2.0e-124 449.9 333 72.4
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 9.8e-124 447.6 349 69.6
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 8.3e-123 444.5 313 75.1
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.9e-122 443.4 289 80.3
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 3.2e-122 442.6 280 81.1
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 1.0e-120 437.6 326 70.2
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 1.3e-120 437.2 352 69.0
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 5.6e-119 431.8 308 72.1
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 6.2e-118 428.3 315 70.8
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 5.2e-117 425.2 309 69.9
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 2.1e-113 413.3 249 84.3
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 2.6e-108 396.4 290 70.0
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 1.4e-101 374.0 308 65.3
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 9.9e-100 367.9 305 64.6
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.7e-89 333.2 225 77.8
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 3.1e-85 319.7 353 55.2
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 6.4e-75 285.4 300 50.3
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 1.1e-74 284.6 295 61.0
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 2.5e-74 283.5 162 88.9
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 4.2e-74 282.7 322 47.8
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 2.3e-72 276.9 351 49.0
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.1e-71 274.6 309 48.2
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 7.4e-71 271.9 181 75.1
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 9.6e-71 271.6 282 59.9
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 2.8e-70 270.0 242 56.6
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 6.5e-59 232.3 142 83.1
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 8.5e-59 231.9 247 55.9
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.5e-55 221.1 120 97.5
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 7.4e-55 218.8 143 80.4
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 6.3e-54 215.7 142 78.2
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 1.4e-40 171.4 123 75.6
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 2.6e-36 157.1 124 67.7
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 2.1e-33 147.5 289 34.9
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 1.3e-30 138.3 177 48.6
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.5e-23 114.8 82 70.7
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 7.5e-15 85.9 74 63.5
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 2.8e-14 84.0 46 89.1
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 6.3e-14 82.8 329 24.3
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 1.8e-13 81.3 48 83.3
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 1.2e-12 78.6 271 28.4
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 2.7e-12 77.4 49 75.5
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 3.9e-11 73.6 67 62.7
arahy.Tifrunner.gnm1.ann1.63F50L Arachis hypogaea HOM05D000300 ORTHO05D000383 7.5e-07 59.3 44 68.2


User provided reference genes

Program Settings