Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00708 Erythranthe guttata HOM05D007713 ORTHO05D009748 7.0e-184 647.1 322 100.0
SGA_v2.0_scaffold8G04513 Striga asiatica HOM05D007713 ORTHO05D009748 6.7e-118 427.9 425 57.9
Oeu047953.1 Olea europaea HOM05D007713 ORTHO05D009748 6.3e-100 368.2 414 53.6
Cc01_g07320 Coffea canephora HOM05D007713 ORTHO05D009748 3.1e-99 365.9 425 51.3
Sopen11g029730 Solanum pennellii HOM05D007713 ORTHO05D009748 1.1e-93 347.4 422 49.1
Peaxi162Scf00978g00032 Petunia axillaris HOM05D007713 ORTHO05D009748 4.8e-92 342.0 412 51.2
Hma1.2p1_0811F.1_g222080 Hydrangea macrophylla HOM05D007713 ORTHO05D009748 4.1e-91 339.0 427 48.7
Thecc.09G252200 Theobroma cacao HOM05D007713 ORTHO05D009748 8.5e-89 331.3 417 47.7
Duzib168G2333 Durio zibethinus HOM05D007713 ORTHO05D009748 1.1e-88 330.9 420 47.9
Manes.02G135500 Manihot esculenta HOM05D007713 ORTHO05D009748 7.2e-88 328.2 424 48.1
Thhalv10004305m.g Eutrema salsugineum HOM05D007713 ORTHO05D009748 1.8e-86 323.6 412 47.6
Cfa009929 Carpinus fangiana HOM05D007713 ORTHO05D009748 4.0e-86 322.4 441 46.3
CSS0029086 Camellia sinensis var. sinensis HOM05D007713 ORTHO05D009748 5.2e-86 322.0 424 48.3
CiPaw.12G120900 Carya illinoinensis HOM05D007713 ORTHO05D009748 4.4e-85 318.9 437 47.8
TWI31G0070 Tripterygium wilfordii HOM05D007713 ORTHO05D009748 9.8e-85 317.8 418 46.2
Gorai.001G132900 Gossypium raimondii HOM05D007713 ORTHO05D009748 1.3e-84 317.4 420 47.6
PGR119G2462 Punica granatum HOM05D007713 ORTHO05D009748 2.2e-84 316.6 436 46.6
Gohir.D07G123200 Gossypium hirsutum HOM05D007713 ORTHO05D009748 1.1e-83 314.3 420 47.4
Sp2g21080 Schrenkiella parvula HOM05D007713 ORTHO05D009748 1.1e-83 314.3 414 47.1
CiPaw.13G147100 Carya illinoinensis HOM05D007713 ORTHO05D009748 1.8e-83 313.5 430 46.7
Potri.001G271900 Populus trichocarpa HOM05D007713 ORTHO05D009748 1.8e-83 313.5 425 45.4
Haze_23299 Corylus avellana HOM05D007713 ORTHO05D009748 2.4e-83 313.2 426 46.9
BcaB04g19704 Brassica carinata HOM05D007713 ORTHO05D009748 5.4e-83 312.0 409 47.9
Haze_23294 Corylus avellana HOM05D007713 ORTHO05D009748 5.4e-83 312.0 431 46.9
Gohir.A07G118900 Gossypium hirsutum HOM05D007713 ORTHO05D009748 5.4e-83 312.0 418 47.1
A09p05580 Brassica napus HOM05D007713 ORTHO05D009748 1.2e-82 310.8 409 47.9
Dinv24613 Davidia involucrata HOM05D007713 ORTHO05D009748 2.0e-82 310.1 414 47.6
Lsat_1_v5_gn_2_31700 Lactuca sativa HOM05D007713 ORTHO05D009748 2.0e-82 310.1 421 45.4
BcaC04g23665 Brassica carinata HOM05D007713 ORTHO05D009748 2.7e-82 309.7 409 47.9
C09p06140 Brassica napus HOM05D007713 ORTHO05D009748 2.7e-82 309.7 409 47.9
BraA09t36199Z Brassica rapa HOM05D007713 ORTHO05D009748 3.5e-82 309.3 409 48.2
Sabra16G0167200 Salix brachista HOM05D007713 ORTHO05D009748 3.5e-82 309.3 427 44.5
QL01p016194 Quercus lobata HOM05D007713 ORTHO05D009748 7.7e-82 308.1 448 43.5
Aa31LG11G9740 Aethionema arabicum HOM05D007713 ORTHO05D009748 1.0e-81 307.8 415 45.5
Ah.06g194890 Amaranthus hybridus HOM05D007713 ORTHO05D009748 1.0e-81 307.8 416 47.8
Potri.009G066500 Populus trichocarpa HOM05D007713 ORTHO05D009748 1.0e-81 307.8 423 44.7
AL6G38870 Arabidopsis lyrata HOM05D007713 ORTHO05D009748 1.7e-81 307.0 409 47.2
BolC9t53535H Brassica oleracea HOM05D007713 ORTHO05D009748 2.2e-81 306.6 409 47.7
CARHR186580 Cardamine hirsuta HOM05D007713 ORTHO05D009748 2.2e-81 306.6 415 47.7
Carub.0006s2459 Capsella rubella HOM05D007713 ORTHO05D009748 3.8e-81 305.8 410 46.6
AUR62000228 Chenopodium quinoa HOM05D007713 ORTHO05D009748 1.5e-80 303.9 418 45.2
AT5G26960 Arabidopsis thaliana HOM05D007713 ORTHO05D009748 4.2e-80 302.4 412 46.1
Cpa.g.sc36.103 Carica papaya HOM05D007713 ORTHO05D009748 4.2e-80 302.4 424 46.0
EL10Ac4g10074 Beta vulgaris HOM05D007713 ORTHO05D009748 7.2e-80 301.6 415 46.0
Actinidia06981 Actinidia chinensis HOM05D007713 ORTHO05D009748 9.4e-80 301.2 414 46.6
AUR62006574 Chenopodium quinoa HOM05D007713 ORTHO05D009748 4.7e-79 298.9 415 45.1
TAR636G2738 Trochodendron aralioides HOM05D007713 ORTHO05D009748 4.7e-79 298.9 416 43.5
Rhsim13G0203800 Rhododendron simsii HOM05D007713 ORTHO05D009748 8.0e-79 298.1 469 41.4
PGSC0003DMG400027417 Solanum tuberosum HOM05D007713 ORTHO05D009748 1.0e-78 297.7 410 46.3
ECA233G2058 Erigeron canadensis HOM05D007713 ORTHO05D009748 1.8e-78 297.0 432 43.8
Solyc11g072080.1 Solanum lycopersicum HOM05D007713 ORTHO05D009748 1.2e-77 294.3 375 47.5
TAR633G2062 Trochodendron aralioides HOM05D007713 ORTHO05D009748 2.0e-77 293.5 420 44.5
HanXRQChr03g0080051 Helianthus annuus HOM05D007713 ORTHO05D009748 9.8e-77 291.2 414 44.9
Lj6g0023778 Lotus japonicus HOM05D007713 ORTHO05D009748 1.4e-75 287.3 416 45.0
Sed0009065 Sechium edule HOM05D007713 ORTHO05D009748 1.6e-74 283.9 432 42.6
Atru.chr3.2844 Acer truncatum HOM05D007713 ORTHO05D009748 2.7e-74 283.1 419 43.4
ClCG03G014250 Citrullus lanatus HOM05D007713 ORTHO05D009748 7.7e-74 281.6 431 42.2
Aqoxy1G02561 Aquilegia oxysepala HOM05D007713 ORTHO05D009748 6.6e-73 278.5 434 40.6
CsaV3_1G041980 Cucumis sativus L. HOM05D007713 ORTHO05D009748 1.5e-72 277.3 438 41.8
MELO3C015613.2 Cucumis melo HOM05D007713 ORTHO05D009748 2.5e-72 276.6 434 41.7
Ca_26656_v3 Cicer arietinum L. HOM05D007713 ORTHO05D009748 4.3e-72 275.8 419 44.2
Medtr3g045210 Medicago truncatula HOM05D007713 ORTHO05D009748 6.1e-71 271.9 407 41.8
Nitab4.5_0002567g0140 Nicotiana tabacum HOM05D007713 ORTHO05D009748 4.0e-70 269.2 221 65.2
Phvul.006G018200 Phaseolus vulgaris HOM05D007713 ORTHO05D009748 4.0e-70 269.2 408 43.1
Nitab4.5_0002161g0070 Nicotiana tabacum HOM05D007713 ORTHO05D009748 8.9e-70 268.1 221 64.7
PSO765G0028 Papaver somniferum HOM05D007713 ORTHO05D009748 8.9e-70 268.1 445 40.0
Lalb_Chr07g0188901 Lupinus albus HOM05D007713 ORTHO05D009748 7.5e-69 265.0 421 41.8
PSO349G0341 Papaver somniferum HOM05D007713 ORTHO05D009748 7.5e-69 265.0 445 41.1
Glyma.20G045100 Glycine max HOM05D007713 ORTHO05D009748 1.8e-67 260.4 420 40.5
VMungo0540G1337 Vigna mungo HOM05D007713 ORTHO05D009748 1.6e-66 257.3 404 41.8
CAN.G280.7 Capsicum annuum HOM05D007713 ORTHO05D009748 7.3e-64 248.4 327 48.0
TPR.G11930 Trifolium pratense HOM05D007713 ORTHO05D009748 1.2e-63 247.7 425 40.2
COL.COLO4_33248 Corchorus olitorius HOM05D007713 ORTHO05D009748 3.6e-63 246.1 251 54.6
Lj2P811T4 Lonicera japonica HOM05D007713 ORTHO05D009748 1.0e-62 244.6 222 60.8
Ciclev10015393m.g Citrus clementina HOM05D007713 ORTHO05D009748 1.2e-61 241.1 418 37.8
MBI19_g04340_MAGBIO Magnolia biondii HOM05D007713 ORTHO05D009748 1.9e-59 233.8 252 51.6
THA.LOC104805019 Tarenaya hassleriana HOM05D007713 ORTHO05D009748 1.7e-57 227.3 430 39.3
GSVIVG01037395001 Vitis vinifera HOM05D007713 ORTHO05D009748 9.8e-53 211.5 318 45.3
Os11g0138700 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 8.9e-46 188.3 414 35.3
Sc16g0010880 Simmondsia chinensis HOM05D007713 ORTHO05D009748 5.8e-45 185.7 213 49.8
Os12g0135200 Oryza sativa ssp. japonica HOM05D007713 ORTHO05D009748 2.2e-44 183.7 414 34.1
SMO116G0438 Selaginella moellendorffii HOM05D007713 ORTHO05D009748 2.0e-37 160.6 396 32.1
Zm00001eb196340 Zea mays HOM05D007713 ORTHO05D009748 2.0e-37 160.6 418 33.7
SEGI_24675 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 4.9e-36 156.0 445 30.8
Mapoly0014s0086 Marchantia polymorpha HOM05D007713 ORTHO05D009748 6.6e-33 145.6 424 28.3
SEGI_20329 Sequoiadendron giganteum HOM05D007713 ORTHO05D009748 4.8e-31 139.4 154 43.5
Pp3c12_25210 Physcomitrium patens HOM05D007713 ORTHO05D009748 1.4e-30 137.9 393 27.5
Pp3c4_2880 Physcomitrium patens HOM05D007713 ORTHO05D009748 3.4e-29 133.3 389 27.2
Nn7g36950 Nelumbo nucifera HOM05D007713 ORTHO05D009748 4.9e-28 129.4 298 34.6
HPP92_018395 Vanilla planifolia HOM05D007713 ORTHO05D009748 6.2e-23 112.5 145 46.9
unitig_736.g22903 Utricularia gibba HOM05D007713 ORTHO05D009748 9.9e-21 105.1 116 56.0
ATR0307G040 Amborella trichopoda HOM05D007713 ORTHO05D009748 2.0e-13 80.9 163 31.9
Glyma.13G360600 Glycine max HOM05D001337 ORTHO05D001281 2.4e-06 57.4 291 25.1
Phvul.005G172400 Phaseolus vulgaris HOM05D001337 ORTHO05D001281 6.9e-06 55.8 290 24.8


User provided reference genes

Program Settings