Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.7e-145 518.1 239 100.0
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 7.2e-109 397.5 244 77.5
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.0e-99 367.1 242 70.7
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 8.8e-99 364.0 227 73.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.6e-95 353.2 231 71.4
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 2.1e-92 342.8 249 64.3
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 6.1e-92 341.3 227 67.8
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.5e-90 336.7 220 70.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 2.6e-90 335.9 227 67.4
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.4e-90 335.5 236 66.1
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 7.5e-90 334.3 217 69.1
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 6.3e-89 331.3 235 65.5
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 8.3e-89 330.9 242 62.8
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.1e-88 328.9 243 62.6
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 5.9e-87 324.7 241 60.6
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 5.9e-87 324.7 227 64.8
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 7.7e-87 324.3 234 62.0
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 5.0e-86 321.6 258 59.7
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 2.1e-84 316.2 233 63.1
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 3.6e-84 315.5 243 58.4
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 4.7e-84 315.1 245 61.2
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 4.7e-84 315.1 245 61.2
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.0e-83 313.9 235 60.4
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 1.8e-83 313.2 245 59.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 3.0e-83 312.4 248 58.5
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 5.2e-83 311.6 236 62.3
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 6.8e-83 311.2 243 59.3
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 2.0e-82 309.7 243 57.6
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 2.6e-82 309.3 213 66.2
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.4e-82 308.9 233 60.9
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 9.8e-82 307.4 223 65.0
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 9.8e-82 307.4 238 58.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.3e-81 307.0 224 63.4
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.3e-81 307.0 242 56.6
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.8e-81 305.8 216 64.8
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 3.7e-81 305.4 234 61.1
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 6.3e-81 304.7 234 59.8
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 6.3e-81 304.7 225 62.2
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.1e-80 303.9 245 56.3
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 3.1e-80 302.4 210 66.7
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 4.1e-80 302.0 270 51.9
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.2e-79 300.4 242 60.7
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.5e-79 298.9 242 60.7
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 5.9e-79 298.1 242 60.3
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.0e-78 297.4 218 61.0
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 2.3e-78 296.2 236 57.6
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 5.0e-78 295.0 238 56.7
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.5e-77 293.5 227 59.9
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 5.6e-77 291.6 270 54.4
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 2.1e-76 289.7 239 56.9
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.1e-76 289.7 243 56.0
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 3.6e-76 288.9 204 63.7
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 4.7e-76 288.5 239 56.5
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 6.1e-76 288.1 248 56.0
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 8.0e-76 287.7 233 59.2
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.0e-75 287.3 271 51.7
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.3e-75 286.2 243 55.1
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 3.0e-75 285.8 227 57.3
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.0e-75 285.4 212 60.8
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 5.2e-75 285.0 243 55.1
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 6.8e-75 284.6 242 55.8
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 8.9e-75 284.3 261 53.3
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.2e-74 283.9 236 55.1
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.5e-74 283.5 249 55.0
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.5e-74 283.5 241 54.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 2.6e-74 282.7 238 54.6
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.6e-74 282.7 265 52.5
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.4e-74 282.3 224 60.7
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 5.8e-74 281.6 235 58.7
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.3e-73 280.4 249 54.2
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.9e-73 279.3 234 59.4
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 2.9e-73 279.3 247 53.8
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.9e-73 279.3 190 64.7
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 3.7e-73 278.9 245 54.7
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 8.3e-73 277.7 244 57.8
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 3.2e-72 275.8 216 59.7
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 5.4e-72 275.0 220 57.3
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 5.4e-72 275.0 220 57.3
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.4e-72 275.0 227 55.1
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 9.2e-72 274.2 234 59.0
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.2e-71 273.9 243 57.2
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 2.0e-71 273.1 240 56.7
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 4.6e-71 271.9 225 55.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 7.8e-71 271.2 199 62.3
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.7e-70 270.0 245 55.5
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 8.6e-70 267.7 193 62.7
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 4.3e-69 265.4 185 64.3
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.2e-68 263.8 248 53.6
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-68 263.5 185 63.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-68 263.5 185 63.2
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-68 263.5 185 63.2
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.2e-68 261.5 236 54.2
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 8.0e-68 261.2 216 57.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.1e-67 260.8 201 59.2
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 6.8e-67 258.1 216 56.5
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.5e-66 256.9 201 59.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.6e-66 256.1 236 53.0
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 7.5e-66 254.6 203 57.6
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 7.0e-64 248.1 165 66.7
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 7.0e-64 248.1 165 66.7
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.6e-63 246.9 199 60.8
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.6e-63 246.9 199 60.8
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 1.7e-62 243.4 186 60.8
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 5.0e-62 241.9 239 51.5
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 4.7e-60 235.3 220 53.2
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.1e-59 232.6 164 64.0
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.0e-59 232.3 231 50.2
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.2e-59 231.9 151 66.2
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.3e-57 227.3 160 65.6
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 7.1e-56 221.5 191 54.5
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.7e-55 219.5 142 67.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.7e-49 200.3 129 60.5
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 2.1e-47 193.4 216 47.2
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.1e-39 166.8 122 59.8
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.5e-34 150.6 120 55.8
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 7.6e-34 148.3 126 54.0
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.4e-32 144.1 84 65.5
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.4e-32 144.1 86 68.6
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 2.5e-29 133.3 87 59.8
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 5.8e-18 95.5 172 37.8
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 1.0e-06 58.2 118 33.9


User provided reference genes

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