Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 5.9e-152 540.8 266 100.0
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 2.5e-70 269.6 271 52.4
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 7.3e-70 268.1 259 53.3
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 1.2e-69 267.3 261 53.6
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 2.1e-69 266.5 264 52.3
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 2.8e-69 266.2 268 54.1
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 8.1e-69 264.6 272 50.7
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 8.1e-69 264.6 264 52.3
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 8.1e-69 264.6 259 52.5
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 1.8e-68 263.5 273 50.5
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 2.4e-68 263.1 274 49.6
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 2.4e-68 263.1 261 53.3
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 2.4e-68 263.1 264 51.1
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 3.1e-68 262.7 264 52.7
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 4.0e-68 262.3 264 50.8
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 4.0e-68 262.3 274 50.0
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 6.9e-68 261.5 261 52.5
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 2.6e-67 259.6 264 51.5
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 2.6e-67 259.6 263 51.7
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 2.2e-66 256.5 277 48.7
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 2.2e-66 256.5 257 51.4
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 2.9e-66 256.1 291 48.1
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 3.8e-66 255.8 264 49.6
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 6.4e-66 255.0 259 51.0
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 8.4e-66 254.6 264 49.2
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 1.1e-65 254.2 264 50.0
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 1.1e-65 254.2 282 47.2
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 1.4e-65 253.8 277 48.4
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 1.9e-65 253.4 264 50.4
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 2.4e-65 253.1 276 48.2
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 2.4e-65 253.1 266 51.1
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 2.4e-65 253.1 259 50.2
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 3.2e-65 252.7 277 48.4
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 4.2e-65 252.3 273 50.2
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 5.4e-65 251.9 275 48.4
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 5.4e-65 251.9 271 48.3
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 5.4e-65 251.9 261 50.6
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 5.4e-65 251.9 259 49.4
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 5.4e-65 251.9 257 50.2
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 1.2e-64 250.8 262 50.0
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 2.1e-64 250.0 275 48.4
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 2.1e-64 250.0 259 51.0
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 2.1e-64 250.0 276 48.6
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 2.7e-64 249.6 288 46.9
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 2.7e-64 249.6 259 51.0
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 3.5e-64 249.2 273 48.0
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 3.5e-64 249.2 259 50.2
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 4.6e-64 248.8 264 49.2
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 1.3e-63 247.3 267 49.8
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 2.3e-63 246.5 264 49.2
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 3.9e-63 245.7 266 48.9
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 5.1e-63 245.4 253 49.4
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 6.6e-63 245.0 273 48.7
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 8.7e-63 244.6 262 49.2
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 8.7e-63 244.6 254 52.0
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 8.7e-63 244.6 283 48.4
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 1.1e-62 244.2 277 49.1
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 1.5e-62 243.8 262 49.2
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 1.5e-62 243.8 256 50.0
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 1.9e-62 243.4 264 48.5
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 4.3e-62 242.3 259 48.3
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 4.3e-62 242.3 273 46.5
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 5.6e-62 241.9 255 50.2
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 5.6e-62 241.9 273 46.2
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 5.6e-62 241.9 265 47.5
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 9.6e-62 241.1 294 48.0
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.3e-61 240.7 255 49.8
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 1.6e-61 240.4 262 47.7
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 2.1e-61 240.0 277 47.7
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 3.6e-61 239.2 273 46.2
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 3.6e-61 239.2 273 45.4
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 3.6e-61 239.2 252 50.8
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 8.1e-61 238.0 273 45.4
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 1.1e-60 237.7 249 50.6
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 2.4e-60 236.5 265 47.5
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 1.5e-59 233.8 274 48.2
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 2.0e-59 233.4 277 47.7
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 2.6e-59 233.0 274 47.8
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 2.6e-59 233.0 274 47.8
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 3.4e-59 232.6 303 43.6
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 5.8e-59 231.9 262 48.5
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 5.8e-59 231.9 262 48.5
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 5.8e-59 231.9 250 50.0
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 7.6e-59 231.5 255 48.2
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 1.3e-58 230.7 288 45.8
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 1.7e-58 230.3 250 50.0
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 2.9e-58 229.6 291 45.7
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 3.8e-58 229.2 289 45.3
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 3.8e-58 229.2 253 47.0
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 4.9e-58 228.8 319 41.4
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 6.4e-58 228.4 255 49.0
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 8.4e-58 228.0 251 47.4
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 2.4e-57 226.5 277 45.8
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 9.3e-57 224.6 259 46.7
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.6e-56 223.8 275 44.0
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 2.1e-56 223.4 191 58.1
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 2.7e-56 223.0 256 48.0
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 1.8e-55 220.3 258 46.9
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 6.7e-55 218.4 270 45.9
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.1e-54 217.6 177 59.3
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 3.3e-54 216.1 269 43.5
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.3e-53 214.2 182 58.8
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 1.4e-52 210.7 253 44.7
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 2.4e-52 209.9 180 58.3
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 4.0e-52 209.1 181 55.2
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 1.2e-51 207.6 252 45.2
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 1.1e-49 201.1 189 53.4
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 1.9e-49 200.3 277 41.5
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 1.9e-49 200.3 248 44.0
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 6.7e-47 191.8 261 43.7
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 2.5e-46 189.9 261 42.1
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 5.6e-46 188.7 155 56.1
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 2.4e-44 183.3 281 41.6
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 4.2e-41 172.6 291 37.8
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 6.3e-37 158.7 266 35.7
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 9.0e-36 154.8 259 37.1
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 1.1e-33 147.9 232 40.5
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 1.5e-30 137.5 255 36.9
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 1.1e-28 131.3 188 42.0
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.0e-26 124.8 162 44.4
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-20 102.1 117 45.3
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 2.6e-19 100.1 95 58.9
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 2.1e-16 90.5 156 38.5
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 2.1e-16 90.5 87 55.2
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.7e-13 80.9 64 51.6
TPR.G22569 Trifolium pratense HOM05D005532 ORTHO05D006873 2.4e-12 77.0 103 42.7
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 1.5e-09 67.8 113 41.6
unitig_62.g23890 Utricularia gibba HOM05D005532 ORTHO05D006873 8.8e-07 58.5 45 60.0
Hma1.2p1_2169F.1_g315910 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 2.0e-06 57.4 67 43.3


User provided reference genes

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