Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 2.1e-247 858.6 434 100.0
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 1.7e-204 716.1 435 81.8
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 2.3e-198 695.7 435 78.6
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 1.7e-196 689.5 419 80.9
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 3.6e-191 671.8 435 77.0
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 1.1e-187 660.2 432 75.0
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 4.1e-187 658.3 416 76.0
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 2.7e-186 655.6 401 78.8
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 5.9e-186 654.4 434 75.8
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 1.3e-185 653.3 434 76.3
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.7e-185 652.9 434 75.1
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 6.6e-185 651.0 401 79.1
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 8.6e-185 650.6 434 75.8
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 8.6e-185 650.6 400 78.2
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 1.1e-184 650.2 400 78.8
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 1.5e-184 649.8 401 78.8
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 4.2e-184 648.3 409 77.8
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 7.2e-184 647.5 429 74.4
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 7.2e-184 647.5 401 78.1
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 9.5e-184 647.1 418 76.3
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 1.6e-183 646.4 434 75.1
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 2.1e-183 646.0 402 78.9
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 2.8e-183 645.6 434 74.7
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 2.8e-183 645.6 400 77.5
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 3.6e-183 645.2 400 78.8
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 3.6e-183 645.2 401 77.8
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 4.7e-183 644.8 434 75.3
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 4.7e-183 644.8 409 76.0
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 1.0e-182 643.7 401 77.8
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 1.0e-182 643.7 400 77.5
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 1.4e-182 643.3 401 77.6
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 5.2e-182 641.3 445 73.5
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 1.2e-181 640.2 401 78.1
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 1.2e-181 640.2 434 72.8
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 2.0e-181 639.4 403 77.2
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 2.6e-181 639.0 406 75.4
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 4.4e-181 638.3 403 77.2
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 5.7e-181 637.9 429 72.7
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 5.7e-181 637.9 399 77.7
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 1.7e-180 636.3 402 77.6
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 1.8e-179 632.9 392 78.6
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 1.8e-179 632.9 403 76.2
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 1.8e-179 632.9 400 77.2
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 5.4e-179 631.3 399 75.9
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 7.0e-179 630.9 392 77.6
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 7.0e-179 630.9 429 73.7
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 2.0e-178 629.4 434 72.6
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 3.5e-178 628.6 434 71.0
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 3.5e-178 628.6 401 76.8
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 1.0e-177 627.1 400 75.8
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 2.3e-177 625.9 400 75.2
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 5.0e-177 624.8 418 72.0
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 6.6e-177 624.4 434 72.4
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 8.6e-177 624.0 418 71.5
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 8.6e-177 624.0 400 75.5
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 8.6e-177 624.0 418 71.5
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 1.5e-176 623.2 418 72.2
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 1.9e-176 622.9 403 76.2
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 2.5e-176 622.5 411 74.9
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 4.3e-176 621.7 434 70.7
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 7.3e-176 620.9 433 71.4
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 9.5e-176 620.5 392 75.5
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 1.2e-175 620.2 439 71.5
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 2.1e-175 619.4 418 71.5
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 1.0e-174 617.1 429 72.3
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 6.8e-174 614.4 421 69.8
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 3.4e-173 612.1 421 69.6
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 5.8e-173 611.3 439 70.8
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 1.9e-171 606.3 454 68.5
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 7.8e-170 600.9 405 73.6
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 1.0e-169 600.5 452 68.8
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 1.3e-169 600.1 432 70.1
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 1.1e-168 597.0 400 72.2
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 3.3e-168 595.5 400 72.0
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 3.3e-168 595.5 407 71.3
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 5.6e-168 594.7 383 76.2
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 9.5e-168 594.0 421 68.9
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 9.5e-168 594.0 421 68.9
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 3.7e-164 582.0 420 69.0
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 4.6e-162 575.1 364 77.2
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 7.8e-162 574.3 404 67.6
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 3.0e-161 572.4 385 74.5
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 3.9e-161 572.0 385 73.8
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 4.3e-160 568.5 580 55.2
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 1.6e-159 566.6 392 68.6
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 2.8e-159 565.8 411 67.6
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 1.1e-158 563.9 433 67.0
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 3.1e-158 562.4 406 67.2
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 5.8e-157 558.1 372 73.7
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 3.7e-156 555.4 387 68.7
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 3.9e-153 545.4 395 69.4
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 2.5e-152 542.7 399 68.7
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 2.0e-149 533.1 331 78.9
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.2e-146 523.9 396 63.1
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 1.5e-144 516.9 382 69.4
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 6.2e-143 511.5 366 68.3
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 3.1e-142 509.2 398 60.8
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 1.3e-140 503.8 344 70.3
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 2.9e-140 502.7 381 62.5
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 4.9e-140 501.9 338 71.0
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 4.9e-140 501.9 339 75.2
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 5.4e-139 498.4 378 63.2
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 1.6e-135 486.9 334 71.9
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 3.9e-129 465.7 411 60.6
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 4.5e-125 452.2 324 70.1
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 1.0e-121 441.0 357 65.5
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 1.3e-113 414.1 377 53.6
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 1.3e-111 407.5 264 74.6
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 1.4e-110 404.1 261 75.1
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 5.0e-108 395.6 277 71.5
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 7.7e-101 371.7 319 58.9
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 5.0e-100 369.0 324 58.6
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 8.5e-100 368.2 410 48.3
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 2.2e-95 353.6 398 46.2
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.1e-94 351.3 228 74.1
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 1.9e-91 340.5 399 45.6
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 2.3e-73 280.4 187 76.5
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 3.8e-68 263.1 274 50.0
arahy.Tifrunner.gnm1.ann1.MM015B Arachis hypogaea HOM05D005532 ORTHO05D006873 2.1e-66 257.3 170 70.0
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 1.5e-64 251.1 232 57.3
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 4.7e-58 229.6 149 73.8
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 4.9e-55 219.5 344 35.2
CsaV3_6G039160 Cucumis sativus L. HOM05D005532 ORTHO05D006873 2.7e-53 213.8 129 79.8
CSS0040461 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 8.9e-49 198.7 122 77.9
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 7.8e-45 185.7 174 55.2
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 3.3e-35 153.7 142 57.0
TPR.G22569 Trifolium pratense HOM05D005532 ORTHO05D006873 1.4e-30 138.3 108 65.7
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 1.1e-27 128.6 416 29.8
HanXRQChr09g0270661 Helianthus annuus HOM05D000715 ORTHO05D000024 1.6e-26 124.8 83 69.9
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 9.0e-25 119.0 95 64.2
Hma1.2p1_2169F.1_g315910 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 5.8e-24 116.3 93 64.5
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 5.6e-19 99.8 64 67.2
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 2.2e-15 87.8 87 51.7
SEGI_01014 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 4.2e-14 83.6 68 58.8
unitig_62.g23890 Utricularia gibba HOM05D005532 ORTHO05D006873 1.6e-13 81.6 67 65.7
HanXRQChr13g0403791 Helianthus annuus HOM05D005532 ORTHO05D006873 1.0e-12 79.0 49 73.5
Os11g0140700 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 4.3e-11 73.6 62 51.6
RhsimUnG0131100 Rhododendron simsii HOM05D005532 ORTHO05D000282 4.5e-08 63.5 45 64.4
GSVIVG01003967001 Vitis vinifera HOM05D003363 ORTHO05D003952 1.7e-07 61.6 51 52.9
AUR62039850 Chenopodium quinoa HOM05D005532 ORTHO05D006873 2.2e-07 61.2 40 77.5
ATR0721G059 Amborella trichopoda HOM05D005532 ORTHO05D006873 3.8e-07 60.5 56 55.4


User provided reference genes

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