Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 1.0e-145 520.0 256 100.0
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 9.1e-118 427.2 254 81.1
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.6e-114 416.4 253 80.2
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 5.2e-113 411.4 253 78.3
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 5.3e-110 401.4 249 77.5
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 3.1e-102 375.6 251 70.5
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 6.5e-100 367.9 217 80.2
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.5e-99 366.7 256 67.6
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 3.2e-99 365.5 256 68.8
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 5.5e-99 364.8 251 70.1
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 5.5e-99 364.8 217 79.7
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 9.4e-99 364.0 256 67.6
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 1.2e-98 363.6 254 67.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.2e-98 363.6 239 73.6
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.6e-98 363.2 223 78.0
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 3.6e-98 362.1 230 73.9
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 3.6e-98 362.1 221 77.4
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 4.7e-98 361.7 246 68.7
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 8.0e-98 360.9 253 69.6
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 8.0e-98 360.9 256 68.4
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 1.8e-97 359.8 254 68.9
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 1.8e-97 359.8 223 77.1
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.0e-97 359.0 252 67.5
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 3.0e-97 359.0 223 76.7
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 4.0e-97 358.6 223 76.2
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 6.8e-97 357.8 249 67.5
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 1.2e-96 357.1 250 68.0
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.2e-96 357.1 251 66.9
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 4.4e-96 355.1 251 68.1
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 1.3e-95 353.6 251 68.1
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 1.3e-95 353.6 251 66.5
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.7e-95 353.2 251 68.9
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.7e-95 353.2 251 69.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.7e-95 353.2 256 67.6
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 2.8e-95 352.4 223 75.3
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.8e-95 352.4 252 67.1
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.7e-95 352.1 251 68.5
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 3.7e-95 352.1 214 76.6
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.1e-94 350.5 254 68.5
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.1e-94 350.5 245 68.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.4e-94 350.1 231 72.7
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.4e-94 349.4 230 71.3
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.4e-94 349.4 251 68.1
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.4e-94 349.4 231 72.7
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.4e-94 349.4 253 68.0
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 4.1e-94 348.6 254 66.5
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 4.1e-94 348.6 256 66.4
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 1.2e-93 347.1 254 68.9
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.6e-93 346.7 246 69.5
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.6e-93 346.7 231 72.3
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.6e-93 346.7 251 68.1
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 4.5e-93 345.1 253 66.4
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 4.5e-93 345.1 239 69.9
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 5.9e-93 344.7 256 65.2
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.0e-92 344.0 255 68.6
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 1.3e-92 343.6 247 66.8
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.3e-92 343.6 256 66.0
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.7e-92 343.2 239 69.5
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.7e-92 343.2 218 72.5
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 1.7e-92 343.2 254 66.1
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 2.9e-92 342.4 223 71.7
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.9e-92 342.4 254 66.1
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.9e-92 342.4 217 75.6
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 3.8e-92 342.0 231 68.8
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.0e-92 341.7 231 68.8
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.0e-92 341.7 231 71.9
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 6.6e-92 341.3 233 67.8
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 6.6e-92 341.3 227 69.6
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 6.6e-92 341.3 216 75.5
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 6.6e-92 341.3 256 64.8
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 2.5e-91 339.3 227 69.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 4.2e-91 338.6 253 66.0
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 5.5e-91 338.2 249 65.1
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 2.8e-90 335.9 251 66.9
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 8.0e-90 334.3 227 67.8
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.4e-89 333.6 217 73.3
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 4.4e-88 328.6 261 63.2
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 5.7e-88 328.2 246 65.9
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 5.7e-88 328.2 253 61.7
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 2.8e-87 325.9 232 69.4
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 2.4e-86 322.8 217 72.8
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 2.4e-86 322.8 233 67.0
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 7.0e-86 321.2 217 73.7
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 9.2e-86 320.9 249 65.5
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.2e-85 320.5 253 61.7
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.0e-85 319.7 246 64.2
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.0e-84 317.4 217 71.4
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 1.3e-84 317.0 261 61.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 2.9e-84 315.8 214 68.7
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 2.9e-84 315.8 220 69.5
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 3.8e-84 315.5 212 69.8
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.5e-83 313.5 217 71.4
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.5e-83 312.8 217 71.0
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 2.1e-82 309.7 217 70.5
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 4.7e-82 308.5 217 71.0
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.4e-81 307.0 217 70.0
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 1.4e-81 307.0 227 67.0
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.4e-81 307.0 217 70.0
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.4e-81 307.0 217 70.0
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 1.5e-80 303.5 215 69.3
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.5e-80 303.5 217 69.6
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 1.5e-80 303.5 215 69.3
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 1.5e-80 303.5 215 69.3
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.5e-80 303.5 227 66.5
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.6e-80 302.8 217 69.1
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 9.8e-80 300.8 230 63.5
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 1.4e-78 297.0 212 63.7
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 4.1e-78 295.4 246 58.1
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 5.4e-78 295.0 246 56.5
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 5.4e-78 295.0 248 58.5
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 9.2e-78 294.3 215 66.5
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.7e-77 292.7 180 77.2
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 5.0e-76 288.5 247 55.9
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 2.3e-73 279.6 217 60.8
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 1.2e-72 277.3 210 61.4
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 5.8e-72 275.0 211 62.6
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.1e-70 270.8 217 64.1
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.1e-69 266.5 246 56.5
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 2.3e-60 236.5 186 60.2
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 2.2e-55 219.9 164 65.9
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 1.0e-44 184.5 179 53.6
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 3.0e-44 183.0 137 65.7
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 1.6e-42 177.2 145 60.0
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 8.1e-42 174.9 216 44.4
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.0e-32 143.7 114 64.0
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 8.4e-31 138.3 167 43.7
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 9.3e-30 134.8 195 41.5
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 9.6e-27 124.8 99 58.6
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.1e-11 74.7 48 62.5
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 4.8e-10 69.3 44 65.9
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 9.4e-06 55.1 68 39.7


User provided reference genes

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