Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 2.7e-155 552.0 287 100.0
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 2.5e-76 289.7 297 60.9
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 1.8e-69 266.9 295 58.3
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 3.3e-68 262.7 304 54.3
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 2.9e-64 249.6 297 54.5
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 4.8e-59 232.3 284 51.8
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 1.8e-58 230.3 300 50.3
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 4.1e-58 229.2 300 51.0
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 6.9e-58 228.4 302 49.0
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 2.6e-57 226.5 301 48.5
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 5.9e-57 225.3 278 53.2
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 1.0e-56 224.6 291 51.2
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 1.0e-56 224.6 294 50.3
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 1.3e-56 224.2 294 51.4
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 2.9e-56 223.0 300 50.0
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 5.0e-56 222.2 300 48.7
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 6.5e-56 221.9 288 51.0
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 2.5e-55 219.9 298 48.3
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 1.2e-54 217.6 294 47.6
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 2.1e-54 216.9 296 48.0
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 2.0e-52 210.3 300 47.0
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 2.6e-52 209.9 294 48.3
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 5.7e-52 208.8 347 42.4
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.7e-51 207.2 294 46.9
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 2.0e-49 200.3 295 48.5
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 5.9e-49 198.7 296 47.6
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 2.2e-48 196.8 191 58.6
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 6.5e-48 195.3 292 45.5
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.4e-47 194.1 292 46.2
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 1.4e-47 194.1 292 45.5
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 1.4e-47 194.1 191 61.3
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 1.9e-47 193.7 291 46.0
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 3.2e-47 193.0 286 45.1
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 5.5e-47 192.2 292 45.9
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.5e-47 192.2 297 48.1
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.2e-46 191.0 312 44.6
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.6e-46 190.7 189 57.1
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 2.7e-46 189.9 305 44.3
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 2.3e-45 186.8 296 43.6
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 9.7e-44 181.4 197 52.3
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 9.7e-44 181.4 223 50.2
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 2.8e-43 179.9 173 62.4
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.8e-43 179.9 265 46.8
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 2.8e-43 179.9 265 46.8
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 3.7e-43 179.5 294 45.2
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 4.8e-43 179.1 293 46.4
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.8e-42 177.2 297 42.1
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.1e-42 176.4 305 43.9
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 1.2e-41 174.5 292 44.5
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.6e-41 173.3 191 55.0
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.5e-41 172.9 322 41.3
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 5.9e-41 172.2 293 44.4
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 8.5e-40 168.3 286 44.1
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 8.5e-40 168.3 312 41.0
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 1.1e-39 167.9 191 56.5
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 4.2e-39 166.0 282 43.6
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 5.5e-39 165.6 313 38.7
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 2.1e-38 163.7 292 42.8
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 8.0e-38 161.8 191 50.8
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 8.0e-38 161.8 188 53.2
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 1.4e-37 161.0 304 41.1
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 3.4e-36 156.4 258 43.0
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 6.3e-35 152.1 173 51.4
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 1.4e-34 151.0 191 47.1
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 1.8e-34 150.6 303 38.9
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 5.3e-34 149.1 190 51.1
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 2.0e-33 147.1 193 50.3
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 4.5e-33 146.0 294 40.1
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 1.3e-32 144.4 298 38.9
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 8.5e-32 141.7 185 47.6
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 1.5e-31 141.0 251 40.6
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 1.5e-31 141.0 165 52.1
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 4.2e-31 139.4 199 48.7
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 2.3e-29 133.7 297 34.3
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 3.0e-29 133.3 285 37.2
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 5.2e-29 132.5 187 49.2
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 8.8e-29 131.7 116 64.7
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 2.0e-28 130.6 203 43.8
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.7e-27 127.5 300 35.3
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.7e-27 126.3 298 35.9
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 4.8e-27 125.9 256 36.3
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.4e-26 123.6 297 35.7
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 9.1e-26 121.7 298 34.6
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 9.1e-26 121.7 293 34.8
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 4.5e-25 119.4 221 39.4
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 2.3e-24 117.1 197 43.7
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 6.6e-24 115.5 291 33.7
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 7.2e-23 112.1 190 41.1
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 9.5e-23 111.7 256 34.4
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 6.1e-22 109.0 288 31.6
Medtr0027s0200 Medicago truncatula HOM05D000347 ORTHO05D008062 3.0e-21 106.7 198 43.4
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 4.0e-21 106.3 145 45.5
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 1.5e-20 104.4 118 50.0
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 2.0e-20 104.0 303 35.6
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 3.7e-19 99.8 299 35.5
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 5.4e-18 95.9 225 33.8
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 2.0e-17 94.0 309 34.0
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 2.3e-16 90.5 303 30.4
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 2.3e-16 90.5 194 37.1
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 1.1e-15 88.2 283 30.7
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 1.1e-15 88.2 283 30.7
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 3.3e-15 86.7 123 43.1
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 3.3e-15 86.7 163 41.7
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 5.6e-15 85.9 285 30.5
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 5.6e-15 85.9 289 30.1
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 5.6e-15 85.9 284 30.6
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 1.2e-14 84.7 177 41.2
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 1.2e-14 84.7 82 53.7
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 1.6e-14 84.3 285 31.2
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 3.6e-14 83.2 299 33.4
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 1.0e-13 81.6 143 45.5
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 2.6e-12 77.0 229 35.4
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 7.0e-10 68.9 260 29.2
EL10Ac7g17790 Beta vulgaris HOM05D000347 ORTHO05D008062 9.2e-10 68.6 239 31.4
THA.LOC104804603 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 1.6e-09 67.8 303 27.7
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 1.7e-08 64.3 229 31.9
Zm00001eb379630 Zea mays HOM05D042818 ORTHO05D008062 5.0e-08 62.8 190 32.1
Nitab4.5_0006773g0040 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.6e-07 59.3 42 61.9
CARHR101080 Cardamine hirsuta HOM05D011699 ORTHO05D008062 7.3e-07 58.9 296 27.4
ECA248G1409 Erigeron canadensis HOM05D000102 ORTHO05D000138 2.1e-06 57.4 84 42.9


User provided reference genes

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