Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 7.6e-272 939.9 470 100.0
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 2.0e-139 500.0 445 59.1
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.2e-126 457.6 458 52.2
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.3e-117 427.6 478 50.6
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 1.7e-117 427.2 472 50.2
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 1.6e-115 420.6 507 46.9
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 5.9e-115 418.7 466 48.7
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 2.3e-114 416.8 468 48.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 2.6e-110 403.3 465 46.5
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 5.7e-110 402.1 476 46.4
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 1.3e-109 401.0 465 47.5
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 3.7e-109 399.4 481 46.2
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 6.3e-109 398.7 466 47.2
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 8.3e-109 398.3 495 45.7
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 4.3e-105 386.0 486 44.7
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 1.2e-104 384.4 497 45.3
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 3.1e-103 379.8 459 46.8
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 6.8e-103 378.6 462 44.2
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 8.9e-103 378.3 453 45.9
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 4.4e-102 375.9 469 45.4
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 5.8e-102 375.6 468 45.9
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.3e-101 374.4 493 43.8
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.9e-101 373.2 470 44.9
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 3.7e-101 372.9 467 44.3
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 4.9e-101 372.5 470 44.9
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 8.3e-101 371.7 496 44.2
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 5.4e-100 369.0 442 46.2
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 1.2e-99 367.9 463 44.5
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 4.6e-99 365.9 472 42.4
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 1.3e-98 364.4 466 44.4
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 1.5e-97 360.9 466 45.3
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 7.3e-97 358.6 442 44.1
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 4.7e-96 355.9 466 45.1
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 6.8e-95 352.1 465 41.7
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.5e-91 339.7 449 42.5
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.5e-91 339.7 450 42.0
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.3e-90 337.0 433 42.5
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 3.6e-88 329.7 460 41.3
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 1.8e-87 327.4 358 50.0
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 3.1e-87 326.6 359 49.6
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.5e-86 324.3 478 41.8
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 3.4e-86 323.2 449 42.1
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-85 321.2 423 42.3
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 8.3e-85 318.5 449 42.3
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 4.1e-84 316.2 463 40.4
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 2.3e-82 310.5 466 41.8
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 3.0e-82 310.1 463 40.4
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 2.5e-81 307.0 463 40.4
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 5.6e-81 305.8 466 39.1
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 9.6e-81 305.1 466 39.3
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 1.6e-80 304.3 467 41.5
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 4.7e-80 302.8 466 39.1
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 4.7e-80 302.8 466 39.1
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 6.8e-79 298.9 467 39.0
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 2.7e-75 287.0 407 40.3
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 6.2e-72 275.8 415 38.3
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 9.0e-71 271.9 405 40.7
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.5e-70 271.2 450 37.8
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 4.9e-69 266.2 462 35.7
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 2.4e-68 263.8 321 44.5
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.6e-67 261.2 474 34.6
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 5.1e-66 256.1 373 39.1
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 6.9e-63 245.7 466 34.3
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 2.6e-62 243.8 404 37.4
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 2.1e-59 234.2 315 43.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 8.7e-58 228.8 409 36.9
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 1.9e-57 227.6 397 36.8
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.3e-55 219.5 215 52.1
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 2.7e-51 207.2 224 46.0
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 5.8e-46 189.5 231 43.3
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 2.5e-41 174.1 277 37.2
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 5.0e-37 159.8 292 38.0
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 4.8e-32 143.3 238 37.0
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 9.1e-23 112.5 259 29.7
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.0e-22 111.3 89 58.4
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 9.4e-20 102.4 449 23.8
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 1.6e-19 101.7 350 28.0
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 3.3e-17 94.0 464 22.8
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 7.4e-17 92.8 56 69.6
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.1e-12 79.0 73 50.7
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 9.8e-09 65.9 153 30.7
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 8.3e-08 62.8 44 59.1


User provided reference genes

Program Settings