Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 6.4e-50 201.1 154 100.0
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 6.8e-36 154.5 177 54.8
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.5e-35 153.3 122 70.5
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.8e-35 151.4 122 67.2
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 7.6e-35 151.0 120 67.5
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.2e-34 149.4 121 66.1
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 3.7e-34 148.7 120 68.3
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 8.4e-34 147.5 120 67.5
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.4e-33 146.0 120 67.5
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.2e-33 145.6 175 51.4
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 4.1e-33 145.2 120 66.7
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 4.1e-33 145.2 120 66.7
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 9.2e-33 144.1 120 65.8
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 6.0e-32 141.4 121 64.5
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 7.8e-32 141.0 129 81.4
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.0e-31 140.6 120 65.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.7e-31 139.8 120 63.3
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 2.3e-31 139.4 122 61.5
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 3.9e-31 138.7 122 63.9
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 5.1e-31 138.3 120 63.3
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 8.6e-31 137.5 120 65.8
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.1e-30 137.1 123 71.5
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 1.1e-30 137.1 122 61.5
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.1e-30 137.1 120 62.5
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.3e-30 135.2 122 60.7
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.3e-30 135.2 122 60.7
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 4.3e-30 135.2 119 64.7
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 4.3e-30 135.2 122 62.3
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.3e-30 135.2 163 51.5
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 5.6e-30 134.8 119 63.9
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 5.6e-30 134.8 122 61.5
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 9.6e-30 134.0 120 63.3
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 9.6e-30 134.0 120 60.8
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 9.6e-30 134.0 122 78.7
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.2e-29 133.7 120 61.7
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.6e-29 133.3 119 63.9
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.6e-29 133.3 120 63.3
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.6e-29 133.3 122 75.4
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 2.1e-29 132.9 131 58.0
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 2.8e-29 132.5 120 60.8
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.8e-29 132.5 120 61.7
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.8e-29 132.5 167 52.7
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 4.7e-29 131.7 120 61.7
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 6.2e-29 131.3 119 64.7
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 8.1e-29 131.0 120 62.5
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 8.1e-29 131.0 122 74.6
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.1e-28 130.6 163 50.3
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.4e-28 130.2 120 61.7
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.4e-28 129.4 119 61.3
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 3.1e-28 129.0 164 48.8
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 4.0e-28 128.6 119 64.7
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 5.2e-28 128.3 120 60.8
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 1.2e-27 127.1 124 59.7
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 1.5e-27 126.7 121 60.3
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.0e-27 126.3 166 55.4
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 2.0e-27 126.3 122 74.6
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 2.6e-27 125.9 120 65.0
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 3.4e-27 125.6 166 48.2
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 4.4e-27 125.2 121 60.3
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 7.6e-27 124.4 122 56.6
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.2e-25 119.0 124 55.6
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 7.1e-25 117.9 162 60.5
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.5e-24 115.5 130 52.3
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.9e-23 112.1 105 61.0
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 6.6e-23 111.3 122 50.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.5e-22 109.4 122 50.0
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 3.3e-22 109.0 122 49.2
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 2.1e-21 106.3 119 53.8
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 2.8e-21 105.9 122 49.2
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.6e-21 105.5 122 50.0
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 3.6e-21 105.5 122 50.0
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.6e-21 105.5 122 50.0
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.6e-21 105.5 122 50.0
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 3.6e-21 105.5 122 50.0
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.6e-21 105.5 123 48.8
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 8.1e-21 104.4 123 50.4
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.1e-20 104.0 123 48.8
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.4e-20 103.6 130 50.0
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.8e-20 103.2 122 48.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 9.0e-20 100.9 124 49.2
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 9.0e-20 100.9 122 50.0
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 2.6e-19 99.4 122 51.6
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.6e-19 99.4 163 50.3
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 5.8e-19 98.2 170 38.8
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 1.3e-18 97.1 135 51.9
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.7e-18 96.7 130 46.2
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 2.2e-18 96.3 170 47.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.9e-18 95.9 164 55.5
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 2.9e-18 95.9 139 51.1
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.9e-18 95.9 134 56.7
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 3.8e-18 95.5 167 46.7
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.8e-18 95.5 165 49.1
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 1.1e-17 94.0 160 53.8
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.2e-17 92.0 134 48.5
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 3.9e-15 85.5 121 42.1
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.5e-14 82.8 122 63.1
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 2.5e-14 82.8 122 60.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.5e-14 82.8 122 60.7
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 5.6e-14 81.6 126 53.2
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.3e-13 80.5 122 59.8
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.1e-12 77.4 167 41.3
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 4.5e-11 72.0 120 39.2
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 8.4e-10 67.8 123 54.5
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 2.4e-09 66.2 81 77.8
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 8.7e-07 57.8 134 34.3
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 7.4e-06 54.7 72 41.7


User provided reference genes

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